RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
CNTN4-201ENST00000397459 IL13P35225 146 aa10.07□□□□□ -0.8
CNTN4-201ENST00000397459 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
CNTN4-201ENST00000397459 HS1BP3Q53T59 392 aa10.07□□□□□ -0.8
CNTN4-201ENST00000397459 TNPO1Q92973 898 aaKnown RBP10.07□□□□□ -0.8
CNTN4-201ENST00000397459 MAP2P11137 1827 aaKnown RBP10.06□□□□□ -0.8
CNTN4-201ENST00000397459 AKAP12Q02952 1782 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
CNTN4-201ENST00000397459 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
CNTN4-201ENST00000397459 KLHL40Q2TBA0 621 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 TWISTNBQ3B726 338 aaPredicted RBP10.06□□□□□ -0.8
CNTN4-201ENST00000397459 DCTPP1Q9H773 170 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 ITSN1Q15811 1721 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 PRR36Q9H6K5 1346 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.06□□□□□ -0.8
CNTN4-201ENST00000397459 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
CNTN4-201ENST00000397459 HMMRO75330 724 aa10.05□□□□□ -0.8
CNTN4-201ENST00000397459 REC8O95072 547 aa10.05□□□□□ -0.8
CNTN4-201ENST00000397459 MCM2P49736 904 aa10.05□□□□□ -0.8
CNTN4-201ENST00000397459 COG3Q96JB2 828 aa10.05□□□□□ -0.8
CNTN4-201ENST00000397459 ARHGEF10O15013 1369 aa10.05□□□□□ -0.8
CNTN4-201ENST00000397459 DIP2AQ14689 1571 aa10.05□□□□□ -0.8
CNTN4-201ENST00000397459 ST18O60284 1047 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 ANKRD44Q8N8A2 993 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 KIF2CQ99661 725 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 RRAGDQ9NQL2 400 aaPredicted RBP10.04□□□□□ -0.8
CNTN4-201ENST00000397459 MBIPQ9NS73 344 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 ESPNB1AK53 854 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 TERF1P54274 439 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 TTC22Q5TAA0 569 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 PPP1R9BQ96SB3 815 aa10.04□□□□□ -0.8
CNTN4-201ENST00000397459 TTC21BQ7Z4L5 1316 aa10.03□□□□□ -0.8
CNTN4-201ENST00000397459 ZNF142P52746 1687 aaPredicted RBP10.03□□□□□ -0.8
CNTN4-201ENST00000397459 TPM2P07951 284 aa10.03□□□□□ -0.8
CNTN4-201ENST00000397459 FGD1P98174 961 aa10.03□□□□□ -0.8
CNTN4-201ENST00000397459 SETD1BQ9UPS6 1966 aaKnown RBP10.03□□□□□ -0.8
CNTN4-201ENST00000397459 NUTM2FA1L443 756 aa10.02□□□□□ -0.8
CNTN4-201ENST00000397459 ZNF445P59923 1031 aa10.02□□□□□ -0.8
CNTN4-201ENST00000397459 ANKLE2Q86XL3 938 aa10.02□□□□□ -0.8
CNTN4-201ENST00000397459 RTL1A6NKG5 1358 aa10.02□□□□□ -0.8
CNTN4-201ENST00000397459 DLG5Q8TDM6 1919 aa10.02□□□□□ -0.81
CNTN4-201ENST00000397459 SSH2Q76I76 1423 aa10.02□□□□□ -0.81
CNTN4-201ENST00000397459 OSBPL3Q9H4L5 887 aa10.02□□□□□ -0.81
CNTN4-201ENST00000397459 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.81
CNTN4-201ENST00000397459 RRP9O43818 475 aaKnown RBP10.01□□□□□ -0.81
CNTN4-201ENST00000397459 KCNA6P17658 529 aa10.01□□□□□ -0.81
CNTN4-201ENST00000397459 FBLN1P23142 703 aa10.01□□□□□ -0.81
CNTN4-201ENST00000397459 NME9Q86XW9 330 aa10.01□□□□□ -0.81
CNTN4-201ENST00000397459 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
CNTN4-201ENST00000397459 CHMP4AQ9BY43 222 aa10.01□□□□□ -0.81
CNTN4-201ENST00000397459 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
CNTN4-201ENST00000397459 ATP10DQ9P241 1426 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 MCM5P33992 734 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 CCT4P50991 539 aaKnown RBP10□□□□□ -0.81
CNTN4-201ENST00000397459 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
CNTN4-201ENST00000397459 TOPAZ1Q8N9V7 1692 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 NALCNQ8IZF0 1738 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 CHL1O00533 1208 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 BAG4O95429 457 aaKnown RBP10□□□□□ -0.81
CNTN4-201ENST00000397459 MCCP23508 829 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 SIRT2Q8IXJ6 389 aa10□□□□□ -0.81
CNTN4-201ENST00000397459 ACEP12821 1306 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 HTATSF1O43719 755 aaKnown RBP9.99□□□□□ -0.81
CNTN4-201ENST00000397459 MBD3O95983 291 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 CYP2E1P05181 493 aaPredicted RBP9.99□□□□□ -0.81
CNTN4-201ENST00000397459 ANAPC15P60006 121 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 IL17RAQ96F46 866 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 USP26Q9BXU7 913 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 AOX1Q06278 1338 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 NASPP49321 788 aaPredicted RBP9.99□□□□□ -0.81
CNTN4-201ENST00000397459 PHACTR3Q96KR7 559 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 BABAM1Q9NWV8 329 aa9.99□□□□□ -0.81
CNTN4-201ENST00000397459 DDX49Q9Y6V7 483 aaKnown RBP9.99□□□□□ -0.81
CNTN4-201ENST00000397459 RGPD1P0DJD0 1748 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 ERC2O15083 957 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 AEBP2Q6ZN18 517 aaPredicted RBP9.98□□□□□ -0.81
CNTN4-201ENST00000397459 ZSCAN30Q86W11 494 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 PXDNLA1KZ92 1463 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 USP31Q70CQ4 1352 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 OVOS2A0A0J9YW53 1432 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 RGS12O14924 1447 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 OVOS2Q6IE36 1432 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 CEP85Q6P2H3 762 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
CNTN4-201ENST00000397459 TSPYL6Q8N831 410 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 NAP1L5Q96NT1 182 aaPredicted RBP9.98□□□□□ -0.81
CNTN4-201ENST00000397459 PANK2Q9BZ23 570 aa9.98□□□□□ -0.81
CNTN4-201ENST00000397459 TTC21AQ8NDW8 1320 aa9.97□□□□□ -0.81
CNTN4-201ENST00000397459 CHD2O14647 1828 aaKnown RBP9.97□□□□□ -0.81
CNTN4-201ENST00000397459 N4BP2Q86UW6 1770 aaPredicted RBP9.97□□□□□ -0.81
CNTN4-201ENST00000397459 HMOX1P09601 288 aa9.97□□□□□ -0.81
CNTN4-201ENST00000397459 GSPT1P15170 499 aaKnown RBP9.97□□□□□ -0.81
CNTN4-201ENST00000397459 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
CNTN4-201ENST00000397459 SYAP1Q96A49 352 aaPredicted RBP9.97□□□□□ -0.81
CNTN4-201ENST00000397459 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
CNTN4-201ENST00000397459 RGPD8O14715 1765 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms