RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SIRT2Q8IXJ6 389 aa22.92■■□□□ 1.26
PCDHA1-202ENST00000394633 MBIPQ9NS73 344 aa22.92■■□□□ 1.26
PCDHA1-202ENST00000394633 DDX11L8A8MPP1 907 aa22.91■■□□□ 1.26
PCDHA1-202ENST00000394633 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
PCDHA1-202ENST00000394633 PANK2Q9BZ23 570 aa22.9■■□□□ 1.26
PCDHA1-202ENST00000394633 ELL2O00472 640 aaPredicted RBP22.9■■□□□ 1.26
PCDHA1-202ENST00000394633 USP6P35125 1406 aa22.89■■□□□ 1.26
PCDHA1-202ENST00000394633 ANKARQ7Z5J8 1434 aa22.89■■□□□ 1.26
PCDHA1-202ENST00000394633 C14orf37Q86TY3 774 aa22.89■■□□□ 1.26
PCDHA1-202ENST00000394633 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
PCDHA1-202ENST00000394633 TBC1D9Q6ZT07 1266 aa22.88■■□□□ 1.25
PCDHA1-202ENST00000394633 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
PCDHA1-202ENST00000394633 CIZ1Q9ULV3 898 aaPredicted RBP22.88■■□□□ 1.25
PCDHA1-202ENST00000394633 TWISTNBQ3B726 338 aaPredicted RBP22.87■■□□□ 1.25
PCDHA1-202ENST00000394633 TNPO1Q92973 898 aaKnown RBP22.87■■□□□ 1.25
PCDHA1-202ENST00000394633 CD2BP2O95400 341 aaKnown RBP22.86■■□□□ 1.25
PCDHA1-202ENST00000394633 C8orf58Q8NAV2 365 aa22.86■■□□□ 1.25
PCDHA1-202ENST00000394633 SSH2Q76I76 1423 aa22.85■■□□□ 1.25
PCDHA1-202ENST00000394633 TTC21BQ7Z4L5 1316 aa22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 AATKQ6ZMQ8 1374 aa22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 RAB3GAP1Q15042 981 aa22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 CFAP44Q96MT7 982 aa22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 TMEM94Q12767 1356 aa22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 MRE11P49959 708 aa22.84■■□□□ 1.25
PCDHA1-202ENST00000394633 API5Q9BZZ5 524 aaKnown RBP22.82■■□□□ 1.24
PCDHA1-202ENST00000394633 LMOD3Q0VAK6 560 aa22.82■■□□□ 1.24
PCDHA1-202ENST00000394633 FAM83GA6ND36 823 aa22.81■■□□□ 1.24
PCDHA1-202ENST00000394633 RBM42Q9BTD8 480 aaKnown RBP22.81■■□□□ 1.24
PCDHA1-202ENST00000394633 K7ELQ4 463 aaPredicted RBP22.8■■□□□ 1.24
PCDHA1-202ENST00000394633 GRPEL1Q9HAV7 217 aa22.8■■□□□ 1.24
PCDHA1-202ENST00000394633 CDC45O75419 566 aa22.8■■□□□ 1.24
PCDHA1-202ENST00000394633 GBP4Q96PP9 640 aa22.8■■□□□ 1.24
PCDHA1-202ENST00000394633 KIF24Q5T7B8 1368 aa22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 EIF5BO60841 1220 aaKnown RBP22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 GSPT1P15170 499 aaKnown RBP22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 RRS1Q15050 365 aaKnown RBP22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 FOXD4L1Q9NU39 408 aa22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
PCDHA1-202ENST00000394633 ZNF335Q9H4Z2 1342 aaPredicted RBP22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 DCTN1Q14203 1278 aa22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 ESCO1Q5FWF5 840 aa22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 COG3Q96JB2 828 aa22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 XIRP1Q702N8 1843 aaKnown RBP22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 ORAI2Q96SN7 254 aa22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 PHF8Q9UPP1 1060 aa22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
PCDHA1-202ENST00000394633 PLEKHM2Q8IWE5 1019 aa22.77■■□□□ 1.24
PCDHA1-202ENST00000394633 ISY1Q9ULR0 285 aaKnown RBP22.77■■□□□ 1.24
PCDHA1-202ENST00000394633 C19orf44Q9H6X5 657 aa22.77■■□□□ 1.24
PCDHA1-202ENST00000394633 AK9Q5TCS8 1911 aa22.76■■□□□ 1.23
PCDHA1-202ENST00000394633 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
PCDHA1-202ENST00000394633 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
PCDHA1-202ENST00000394633 DCTPP1Q9H773 170 aa22.76■■□□□ 1.23
PCDHA1-202ENST00000394633 PRKCSHP14314 528 aaPredicted RBP22.74■■□□□ 1.23
PCDHA1-202ENST00000394633 INTS3Q68E01 1043 aaKnown RBP22.74■■□□□ 1.23
PCDHA1-202ENST00000394633 RGS12O14924 1447 aa22.73■■□□□ 1.23
PCDHA1-202ENST00000394633 ATP10DQ9P241 1426 aa22.73■■□□□ 1.23
PCDHA1-202ENST00000394633 SKOR2Q2VWA4 1001 aaPredicted RBP22.73■■□□□ 1.23
PCDHA1-202ENST00000394633 TTC22Q5TAA0 569 aa22.73■■□□□ 1.23
PCDHA1-202ENST00000394633 GAS2L3Q86XJ1 694 aa22.73■■□□□ 1.23
PCDHA1-202ENST00000394633 C1orf167Q5SNV9 1468 aa22.72■■□□□ 1.23
PCDHA1-202ENST00000394633 SSFA2P28290 1259 aa22.72■■□□□ 1.23
PCDHA1-202ENST00000394633 MARF1Q9Y4F3 1742 aaKnown RBP22.72■■□□□ 1.23
PCDHA1-202ENST00000394633 TTC21AQ8NDW8 1320 aa22.72■■□□□ 1.23
PCDHA1-202ENST00000394633 SOX12O15370 315 aa22.72■■□□□ 1.23
PCDHA1-202ENST00000394633 PTMSP20962 102 aa22.72■■□□□ 1.23
PCDHA1-202ENST00000394633 CLCN1P35523 988 aa22.71■■□□□ 1.23
PCDHA1-202ENST00000394633 NUTM2GQ5VZR2 741 aa22.71■■□□□ 1.23
PCDHA1-202ENST00000394633 C16orf71Q8IYS4 520 aaPredicted RBP22.71■■□□□ 1.23
PCDHA1-202ENST00000394633 ANKRD44Q8N8A2 993 aa22.7■■□□□ 1.23
PCDHA1-202ENST00000394633 MST1RQ04912 1400 aa22.7■■□□□ 1.22
PCDHA1-202ENST00000394633 FOXO3O43524 673 aa22.7■■□□□ 1.22
PCDHA1-202ENST00000394633 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
PCDHA1-202ENST00000394633 KRT24Q2M2I5 525 aa22.7■■□□□ 1.22
PCDHA1-202ENST00000394633 AEBP1Q8IUX7 1158 aa22.7■■□□□ 1.22
PCDHA1-202ENST00000394633 CLEC17AQ6ZS10 378 aa22.68■■□□□ 1.22
PCDHA1-202ENST00000394633 ATF3P18847 181 aa22.67■■□□□ 1.22
PCDHA1-202ENST00000394633 USP31Q70CQ4 1352 aa22.67■■□□□ 1.22
PCDHA1-202ENST00000394633 DCCP43146 1447 aa22.67■■□□□ 1.22
PCDHA1-202ENST00000394633 EIF4A2Q14240 407 aaKnown RBP22.67■■□□□ 1.22
PCDHA1-202ENST00000394633 RABEP1Q15276 862 aa22.67■■□□□ 1.22
PCDHA1-202ENST00000394633 OTUD7AQ8TE49 926 aaPredicted RBP22.67■■□□□ 1.22
PCDHA1-202ENST00000394633 CEP85Q6P2H3 762 aa22.66■■□□□ 1.22
PCDHA1-202ENST00000394633 USP26Q9BXU7 913 aa22.66■■□□□ 1.22
PCDHA1-202ENST00000394633 MSH6P52701 1360 aa22.66■■□□□ 1.22
PCDHA1-202ENST00000394633 PEAK1Q9H792 1746 aa22.66■■□□□ 1.22
PCDHA1-202ENST00000394633 CHL1O00533 1208 aa22.66■■□□□ 1.22
PCDHA1-202ENST00000394633 SULT6B1Q6IMI4 303 aa22.66■■□□□ 1.22
PCDHA1-202ENST00000394633 NLRP6P59044 892 aa22.65■■□□□ 1.22
PCDHA1-202ENST00000394633 RPAP2Q8IXW5 612 aaPredicted RBP22.65■■□□□ 1.22
PCDHA1-202ENST00000394633 ABTB2Q8N961 1025 aa22.65■■□□□ 1.22
PCDHA1-202ENST00000394633 RGPD1P0DJD0 1748 aa22.65■■□□□ 1.22
PCDHA1-202ENST00000394633 RTL1A6NKG5 1358 aa22.65■■□□□ 1.22
PCDHA1-202ENST00000394633 PSME1Q06323 249 aa22.65■■□□□ 1.22
PCDHA1-202ENST00000394633 BAG4O95429 457 aaKnown RBP22.64■■□□□ 1.21
PCDHA1-202ENST00000394633 KIAA0232Q92628 1395 aa22.64■■□□□ 1.21
PCDHA1-202ENST00000394633 DDX17Q92841 729 aaKnown RBP22.63■■□□□ 1.21
PCDHA1-202ENST00000394633 MCM10Q7L590 875 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms