RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 ZSCAN30Q86W11 494 aa14.22□□□□□ -0.13
PDCD4-202ENST00000393104 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
PDCD4-202ENST00000393104 OTUD7AQ8TE49 926 aaPredicted RBP14.22□□□□□ -0.13
PDCD4-202ENST00000393104 PRAM1Q96QH2 718 aa14.21□□□□□ -0.13
PDCD4-202ENST00000393104 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
PDCD4-202ENST00000393104 ROBO2Q9HCK4 1378 aa14.21□□□□□ -0.13
PDCD4-202ENST00000393104 KIF16BQ96L93 1317 aa14.21□□□□□ -0.13
PDCD4-202ENST00000393104 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
PDCD4-202ENST00000393104 USP26Q9BXU7 913 aa14.21□□□□□ -0.13
PDCD4-202ENST00000393104 NASPP49321 788 aaPredicted RBP14.21□□□□□ -0.14
PDCD4-202ENST00000393104 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.14
PDCD4-202ENST00000393104 NPHP4O75161 1426 aaPredicted RBP14.2□□□□□ -0.14
PDCD4-202ENST00000393104 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
PDCD4-202ENST00000393104 ZNF500O60304 480 aaPredicted RBP14.2□□□□□ -0.14
PDCD4-202ENST00000393104 TPM2P07951 284 aa14.2□□□□□ -0.14
PDCD4-202ENST00000393104 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
PDCD4-202ENST00000393104 ZGPATQ8N5A5 531 aaKnown RBP14.2□□□□□ -0.14
PDCD4-202ENST00000393104 PDCL3Q9H2J4 239 aa14.19□□□□□ -0.14
PDCD4-202ENST00000393104 NOL7Q9UMY1 257 aaKnown RBP14.19□□□□□ -0.14
PDCD4-202ENST00000393104 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
PDCD4-202ENST00000393104 GCC1Q96CN9 775 aa14.19□□□□□ -0.14
PDCD4-202ENST00000393104 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
PDCD4-202ENST00000393104 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
PDCD4-202ENST00000393104 TMEM63CQ9P1W3 806 aa14.18□□□□□ -0.14
PDCD4-202ENST00000393104 RBM27Q9P2N5 1060 aaKnown RBP14.18□□□□□ -0.14
PDCD4-202ENST00000393104 U2SURPO15042 1029 aaKnown RBP14.17□□□□□ -0.14
PDCD4-202ENST00000393104 TERF1P54274 439 aa14.17□□□□□ -0.14
PDCD4-202ENST00000393104 C8orf58Q8NAV2 365 aa14.17□□□□□ -0.14
PDCD4-202ENST00000393104 POLKQ9UBT6 870 aa14.17□□□□□ -0.14
PDCD4-202ENST00000393104 TCHHQ07283 1943 aa14.16□□□□□ -0.14
PDCD4-202ENST00000393104 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
PDCD4-202ENST00000393104 EDC4Q6P2E9 1401 aaKnown RBP14.16□□□□□ -0.14
PDCD4-202ENST00000393104 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
PDCD4-202ENST00000393104 ANKLE2Q86XL3 938 aa14.16□□□□□ -0.14
PDCD4-202ENST00000393104 DCTPP1Q9H773 170 aa14.16□□□□□ -0.14
PDCD4-202ENST00000393104 TTC22Q5TAA0 569 aa14.15□□□□□ -0.14
PDCD4-202ENST00000393104 STRCQ7RTU9 1775 aa14.15□□□□□ -0.14
PDCD4-202ENST00000393104 HS1BP3Q53T59 392 aa14.14□□□□□ -0.15
PDCD4-202ENST00000393104 JARID2Q92833 1246 aaPredicted RBP14.14□□□□□ -0.15
PDCD4-202ENST00000393104 MARF1Q9Y4F3 1742 aaKnown RBP14.14□□□□□ -0.15
PDCD4-202ENST00000393104 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
PDCD4-202ENST00000393104 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
PDCD4-202ENST00000393104 FCHSD2O94868 740 aa14.14□□□□□ -0.15
PDCD4-202ENST00000393104 SAFB2Q14151 953 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDCD4-202ENST00000393104 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
PDCD4-202ENST00000393104 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
PDCD4-202ENST00000393104 XPCQ01831 940 aaPredicted RBP14.13□□□□□ -0.15
PDCD4-202ENST00000393104 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
PDCD4-202ENST00000393104 DDX49Q9Y6V7 483 aaKnown RBP14.13□□□□□ -0.15
PDCD4-202ENST00000393104 SSH2Q76I76 1423 aa14.13□□□□□ -0.15
PDCD4-202ENST00000393104 STRCP1A6NGW2 1772 aa14.13□□□□□ -0.15
PDCD4-202ENST00000393104 RGPD8O14715 1765 aaPredicted RBP14.13□□□□□ -0.15
PDCD4-202ENST00000393104 CDC45O75419 566 aa14.13□□□□□ -0.15
PDCD4-202ENST00000393104 RBM10P98175 930 aaKnown RBP14.13□□□□□ -0.15
PDCD4-202ENST00000393104 STK26Q9P289 416 aa14.13□□□□□ -0.15
PDCD4-202ENST00000393104 IPO8O15397 1037 aaKnown RBP14.12□□□□□ -0.15
PDCD4-202ENST00000393104 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
PDCD4-202ENST00000393104 IL13P35225 146 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 KRT24Q2M2I5 525 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 SALL3Q9BXA9 1300 aa14.12□□□□□ -0.15
PDCD4-202ENST00000393104 ZNF428Q96B54 188 aa14.11□□□□□ -0.15
PDCD4-202ENST00000393104 SDSP20132 328 aa14.11□□□□□ -0.15
PDCD4-202ENST00000393104 MINK1Q8N4C8 1332 aaPredicted RBP14.11□□□□□ -0.15
PDCD4-202ENST00000393104 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
PDCD4-202ENST00000393104 PLEKHG3A1L390 1219 aa14.1□□□□□ -0.15
PDCD4-202ENST00000393104 TRIM44Q96DX7 344 aaPredicted RBP14.1□□□□□ -0.15
PDCD4-202ENST00000393104 FAM83GA6ND36 823 aa14.1□□□□□ -0.15
PDCD4-202ENST00000393104 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
PDCD4-202ENST00000393104 NFE2L2Q16236 605 aa14.1□□□□□ -0.15
PDCD4-202ENST00000393104 RABEP1Q15276 862 aa14.1□□□□□ -0.15
PDCD4-202ENST00000393104 ZKSCAN5Q9Y2L8 839 aa14.1□□□□□ -0.15
PDCD4-202ENST00000393104 DCCP43146 1447 aa14.09□□□□□ -0.15
PDCD4-202ENST00000393104 WAPLQ7Z5K2 1190 aa14.09□□□□□ -0.15
PDCD4-202ENST00000393104 INTS3Q68E01 1043 aaKnown RBP14.09□□□□□ -0.15
PDCD4-202ENST00000393104 IFT57Q9NWB7 429 aa14.09□□□□□ -0.15
PDCD4-202ENST00000393104 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
PDCD4-202ENST00000393104 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
PDCD4-202ENST00000393104 PHRF1Q9P1Y6 1649 aaKnown RBP14.09□□□□□ -0.15
PDCD4-202ENST00000393104 ELL2O00472 640 aaPredicted RBP14.09□□□□□ -0.15
PDCD4-202ENST00000393104 RTL1A6NKG5 1358 aa14.08□□□□□ -0.15
PDCD4-202ENST00000393104 PEAK1Q9H792 1746 aa14.08□□□□□ -0.15
PDCD4-202ENST00000393104 PTMSP20962 102 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 CEP85Q6P2H3 762 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 ZNF710Q8N1W2 664 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 IL17RAQ96F46 866 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 MST1RQ04912 1400 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
PDCD4-202ENST00000393104 SMARCA5O60264 1052 aaPredicted RBP14.08□□□□□ -0.16
PDCD4-202ENST00000393104 PRPF40AO75400 957 aaKnown RBP14.08□□□□□ -0.16
PDCD4-202ENST00000393104 HMOX1P09601 288 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 HDGFL2Q7Z4V5 671 aaPredicted RBP14.08□□□□□ -0.16
PDCD4-202ENST00000393104 ZRANB1Q9UGI0 708 aa14.08□□□□□ -0.16
PDCD4-202ENST00000393104 SRPK2P78362 688 aaKnown RBP14.07□□□□□ -0.16
PDCD4-202ENST00000393104 LRSAM1Q6UWE0 723 aa14.07□□□□□ -0.16
PDCD4-202ENST00000393104 IL25Q9H293 177 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms