RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 ZNF397Q8NF99 534 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 NUP133Q8WUM0 1156 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 TSG101Q99816 390 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 RNF41Q9H4P4 317 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 TMOD3Q9NYL9 352 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 COG6Q9Y2V7 657 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 NOC2LQ9Y3T9 749 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 ACTN2P35609 894 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 AXDND1Q5T1B0 1012 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 SPTY2D1Q68D10 685 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 ZNF771Q7L3S4 317 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 APBB1IPQ7Z5R6 666 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 RGS22Q8NE09 1264 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 TSNARE1Q96NA8 513 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 IPO9Q96P70 1041 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 RBM27Q9P2N5 1060 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 CYP46A1Q9Y6A2 500 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 EXOC5O00471 708 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 FERP16591 822 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 BRDTQ58F21 947 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 IQCA1Q86XH1 822 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 DHX37Q8IY37 1157 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 OGFOD1Q8N543 542 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 CTCFLQ8NI51 663 aaPredicted RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 AIDAQ96BJ3 306 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 CCDC39Q9UFE4 941 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 BAG3O95817 575 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 CEP57L1Q8IYX8 460 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 ZNF428Q96B54 188 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 LRRCC1Q9C099 1032 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 ANKIB1Q9P2G1 1089 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 RAB3GAP2Q9H2M9 1393 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 BRPF1P55201 1214 aaPredicted RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 MAP3K12Q12852 859 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 TAF12Q16514 161 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 MTERF4Q7Z6M4 381 aaKnown RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 SLC26A8Q96RN1 970 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 CDC5LQ99459 802 aaKnown RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 TRIM5Q9C035 493 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 LRRC27Q9C0I9 530 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 FYCO1Q9BQS8 1478 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 KIAA0754O94854 1291 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 HMOX1P09601 288 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 ARHGEF6Q15052 776 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 SREK1Q8WXA9 508 aaKnown RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 ZSCAN31Q96LW9 406 aaPredicted RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 C6orf229H3BNL8 230 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 LPXNO60711 386 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 EIF3JO75822 258 aaKnown RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 SERPINC1P01008 464 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 SSFA2P28290 1259 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 CCDC96Q2M329 555 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 AMOTQ4VCS5 1084 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 CCDC178Q5BJE1 867 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 BICDL1Q6ZP65 573 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 TNPO1Q92973 898 aaKnown RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 PYM1Q9BRP8 204 aaKnown RBP4.66□□□□□ -1.66
UBR3-202ENST00000392632 ABCF2Q9UG63 623 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 CFAP45Q9UL16 551 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 MYOM3Q5VTT5 1437 aa4.66□□□□□ -1.66
UBR3-202ENST00000392632 VIMP08670 466 aaKnown RBP4.65□□□□□ -1.66
UBR3-202ENST00000392632 LMOD1P29536 600 aaPredicted RBP4.65□□□□□ -1.66
UBR3-202ENST00000392632 CA8P35219 290 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 EIF5P55010 431 aaKnown RBP4.65□□□□□ -1.66
UBR3-202ENST00000392632 TAX1BP1Q86VP1 789 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 GCC1Q96CN9 775 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 SPATA32Q96LK8 384 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 TAOK3Q9H2K8 898 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 GGNBP2Q9H3C7 697 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 CTNNA2P26232 953 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 FOSBP53539 338 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 METTL24Q5JXM2 366 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 FKBP15Q5T1M5 1219 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 ARID3AQ99856 593 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 BIN2Q9UBW5 565 aaPredicted RBP4.65□□□□□ -1.66
UBR3-202ENST00000392632 RPGRIP1LQ68CZ1 1315 aa4.65□□□□□ -1.66
UBR3-202ENST00000392632 CCDC172P0C7W6 258 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 SLC5A1P13866 664 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 ST5P78524 1137 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 LARP1Q6PKG0 1096 aaKnown RBP4.65□□□□□ -1.67
UBR3-202ENST00000392632 BLOC1S2Q6QNY1 142 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 DDX46Q7L014 1031 aaKnown RBP4.65□□□□□ -1.67
UBR3-202ENST00000392632 JDP2Q8WYK2 163 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 SMARCC1Q92922 1105 aaPredicted RBP4.65□□□□□ -1.67
UBR3-202ENST00000392632 CDK19Q9BWU1 502 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 PLVAPQ9BX97 442 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 DEKP35659 375 aaKnown RBP4.65□□□□□ -1.67
UBR3-202ENST00000392632 USP8P40818 1118 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 KRT85P78386 507 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 FKBP4Q02790 459 aaKnown RBP eCLIP4.65□□□□□ -1.67
UBR3-202ENST00000392632 CCDC14Q49A88 953 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 LEKR1Q6ZMV7 388 aa4.65□□□□□ -1.67
UBR3-202ENST00000392632 U3KPZ7 1027 aaPredicted RBP4.65□□□□□ -1.67
UBR3-202ENST00000392632 GSTTP1A0A1W2PQM5 241 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 STX6O43752 255 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 IDH1O75874 414 aaKnown RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 GSTO1P78417 241 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 BMS1Q14692 1282 aaKnown RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 TTLL5Q6EMB2 1281 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms