RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
NEK4-202ENST00000383721 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
NEK4-202ENST00000383721 MRPL50Q8N5N7 158 aaKnown RBP17.43■□□□□ 0.38
NEK4-202ENST00000383721 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
NEK4-202ENST00000383721 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
NEK4-202ENST00000383721 SOS2Q07890 1332 aaPredicted RBP17.42■□□□□ 0.38
NEK4-202ENST00000383721 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
NEK4-202ENST00000383721 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
NEK4-202ENST00000383721 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
NEK4-202ENST00000383721 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
NEK4-202ENST00000383721 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
NEK4-202ENST00000383721 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
NEK4-202ENST00000383721 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
NEK4-202ENST00000383721 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
NEK4-202ENST00000383721 GNAI1P63096 354 aa17.41■□□□□ 0.38
NEK4-202ENST00000383721 CHD1LQ86WJ1 897 aa17.41■□□□□ 0.38
NEK4-202ENST00000383721 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
NEK4-202ENST00000383721 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
NEK4-202ENST00000383721 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
NEK4-202ENST00000383721 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
NEK4-202ENST00000383721 AHDC1Q5TGY3 1603 aaPredicted RBP17.4■□□□□ 0.38
NEK4-202ENST00000383721 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
NEK4-202ENST00000383721 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.38
NEK4-202ENST00000383721 PIK3C2AO00443 1686 aa17.39■□□□□ 0.38
NEK4-202ENST00000383721 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
NEK4-202ENST00000383721 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
NEK4-202ENST00000383721 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
NEK4-202ENST00000383721 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
NEK4-202ENST00000383721 NLRP6P59044 892 aa17.37■□□□□ 0.37
NEK4-202ENST00000383721 COG3Q96JB2 828 aa17.37■□□□□ 0.37
NEK4-202ENST00000383721 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
NEK4-202ENST00000383721 ABCC4O15439 1325 aa17.37■□□□□ 0.37
NEK4-202ENST00000383721 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
NEK4-202ENST00000383721 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
NEK4-202ENST00000383721 TWISTNBQ3B726 338 aaPredicted RBP17.36■□□□□ 0.37
NEK4-202ENST00000383721 C8orf58Q8NAV2 365 aa17.36■□□□□ 0.37
NEK4-202ENST00000383721 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
NEK4-202ENST00000383721 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
NEK4-202ENST00000383721 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
NEK4-202ENST00000383721 SOX12O15370 315 aa17.36■□□□□ 0.37
NEK4-202ENST00000383721 HSPA1LP34931 641 aa17.36■□□□□ 0.37
NEK4-202ENST00000383721 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
NEK4-202ENST00000383721 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
NEK4-202ENST00000383721 ANKRD45Q5TZF3 282 aa17.35■□□□□ 0.37
NEK4-202ENST00000383721 SIRT2Q8IXJ6 389 aa17.35■□□□□ 0.37
NEK4-202ENST00000383721 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
NEK4-202ENST00000383721 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
NEK4-202ENST00000383721 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
NEK4-202ENST00000383721 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
NEK4-202ENST00000383721 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
NEK4-202ENST00000383721 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
NEK4-202ENST00000383721 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
NEK4-202ENST00000383721 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
NEK4-202ENST00000383721 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.37
NEK4-202ENST00000383721 MCM4P33991 863 aa17.33■□□□□ 0.36
NEK4-202ENST00000383721 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
NEK4-202ENST00000383721 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
NEK4-202ENST00000383721 HSCBQ8IWL3 235 aa17.33■□□□□ 0.36
NEK4-202ENST00000383721 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
NEK4-202ENST00000383721 MED1Q15648 1581 aaPredicted RBP17.31■□□□□ 0.36
NEK4-202ENST00000383721 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
NEK4-202ENST00000383721 SNX21Q969T3 373 aa17.3■□□□□ 0.36
NEK4-202ENST00000383721 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
NEK4-202ENST00000383721 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
NEK4-202ENST00000383721 DDIT3P35638 169 aa17.29■□□□□ 0.36
NEK4-202ENST00000383721 KIF2CQ99661 725 aa17.29■□□□□ 0.36
NEK4-202ENST00000383721 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
NEK4-202ENST00000383721 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
NEK4-202ENST00000383721 TBC1D9Q6ZT07 1266 aa17.28■□□□□ 0.36
NEK4-202ENST00000383721 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
NEK4-202ENST00000383721 GCP02774 474 aa17.27■□□□□ 0.36
NEK4-202ENST00000383721 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
NEK4-202ENST00000383721 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
NEK4-202ENST00000383721 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
NEK4-202ENST00000383721 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
NEK4-202ENST00000383721 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
NEK4-202ENST00000383721 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
NEK4-202ENST00000383721 SLIT3O75094 1523 aa17.25■□□□□ 0.35
NEK4-202ENST00000383721 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
NEK4-202ENST00000383721 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
NEK4-202ENST00000383721 NFAT5O94916 1531 aa17.24■□□□□ 0.35
NEK4-202ENST00000383721 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
NEK4-202ENST00000383721 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
NEK4-202ENST00000383721 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
NEK4-202ENST00000383721 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
NEK4-202ENST00000383721 CHL1O00533 1208 aa17.24■□□□□ 0.35
NEK4-202ENST00000383721 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
NEK4-202ENST00000383721 JCADQ9P266 1359 aa17.23■□□□□ 0.35
NEK4-202ENST00000383721 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
NEK4-202ENST00000383721 RGS12O14924 1447 aa17.23■□□□□ 0.35
NEK4-202ENST00000383721 ABCA3Q99758 1704 aa17.23■□□□□ 0.35
NEK4-202ENST00000383721 TRAK2O60296 914 aa17.23■□□□□ 0.35
NEK4-202ENST00000383721 GSPT1P15170 499 aaKnown RBP17.23■□□□□ 0.35
NEK4-202ENST00000383721 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
NEK4-202ENST00000383721 MCM10Q7L590 875 aa17.23■□□□□ 0.35
NEK4-202ENST00000383721 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
NEK4-202ENST00000383721 COL22A1Q8NFW1 1626 aaPredicted RBP17.22■□□□□ 0.35
NEK4-202ENST00000383721 CD2BP2O95400 341 aaKnown RBP17.22■□□□□ 0.35
NEK4-202ENST00000383721 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms