RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 KIF2CQ99661 725 aa18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 SMARCA5O60264 1052 aaPredicted RBP18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 MEIS3Q99687 375 aa18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 CHMP4BQ9H444 224 aaKnown RBP18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
SLC39A1-204ENST00000368623 TRAK2O60296 914 aa18.86■□□□□ 0.61
SLC39A1-204ENST00000368623 PLEKHG3A1L390 1219 aa18.86■□□□□ 0.61
SLC39A1-204ENST00000368623 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
SLC39A1-204ENST00000368623 MSH6P52701 1360 aa18.86■□□□□ 0.61
SLC39A1-204ENST00000368623 F6X3S4 739 aa18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 RGS12O14924 1447 aa18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 G2E3Q7L622 706 aa18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 NGDNQ8NEJ9 315 aaKnown RBP18.85■□□□□ 0.61
SLC39A1-204ENST00000368623 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
SLC39A1-204ENST00000368623 INTS3Q68E01 1043 aaKnown RBP18.83■□□□□ 0.61
SLC39A1-204ENST00000368623 NECTIN2Q92692 538 aa18.83■□□□□ 0.61
SLC39A1-204ENST00000368623 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.6
SLC39A1-204ENST00000368623 HSP90AB1P08238 724 aaKnown RBP18.83■□□□□ 0.6
SLC39A1-204ENST00000368623 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
SLC39A1-204ENST00000368623 PLEKHG1Q9ULL1 1385 aa18.82■□□□□ 0.6
SLC39A1-204ENST00000368623 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
SLC39A1-204ENST00000368623 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
SLC39A1-204ENST00000368623 ATP10DQ9P241 1426 aa18.81■□□□□ 0.6
SLC39A1-204ENST00000368623 AMPHP49418 695 aa18.81■□□□□ 0.6
SLC39A1-204ENST00000368623 EID1Q9Y6B2 187 aa18.81■□□□□ 0.6
SLC39A1-204ENST00000368623 LTV1Q96GA3 475 aaPredicted RBP18.8■□□□□ 0.6
SLC39A1-204ENST00000368623 EYA1Q99502 592 aa18.8■□□□□ 0.6
SLC39A1-204ENST00000368623 HSP90AA1P07900 732 aaKnown RBP18.8■□□□□ 0.6
SLC39A1-204ENST00000368623 CDC45O75419 566 aa18.8■□□□□ 0.6
SLC39A1-204ENST00000368623 ANKRD44Q8N8A2 993 aa18.8■□□□□ 0.6
SLC39A1-204ENST00000368623 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
SLC39A1-204ENST00000368623 CRB1P82279 1406 aa18.79■□□□□ 0.6
SLC39A1-204ENST00000368623 FSD2A1L4K1 749 aa18.79■□□□□ 0.6
SLC39A1-204ENST00000368623 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
SLC39A1-204ENST00000368623 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
SLC39A1-204ENST00000368623 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
SLC39A1-204ENST00000368623 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
SLC39A1-204ENST00000368623 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
SLC39A1-204ENST00000368623 USP31Q70CQ4 1352 aa18.78■□□□□ 0.6
SLC39A1-204ENST00000368623 NLRP6P59044 892 aa18.78■□□□□ 0.6
SLC39A1-204ENST00000368623 SNX21Q969T3 373 aa18.78■□□□□ 0.6
SLC39A1-204ENST00000368623 TTC22Q5TAA0 569 aa18.77■□□□□ 0.6
SLC39A1-204ENST00000368623 SSH2Q76I76 1423 aa18.77■□□□□ 0.59
SLC39A1-204ENST00000368623 DDIT3P35638 169 aa18.77■□□□□ 0.59
SLC39A1-204ENST00000368623 TNPO1Q92973 898 aaKnown RBP18.77■□□□□ 0.59
SLC39A1-204ENST00000368623 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
SLC39A1-204ENST00000368623 TSHZ3Q63HK5 1081 aa18.76■□□□□ 0.59
SLC39A1-204ENST00000368623 NCOA3Q9Y6Q9 1424 aa18.76■□□□□ 0.59
SLC39A1-204ENST00000368623 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 GAS2L3Q86XJ1 694 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 VSIG10Q8N0Z9 540 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 FLT4P35916 1363 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 KIAA0232Q92628 1395 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
SLC39A1-204ENST00000368623 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
SLC39A1-204ENST00000368623 SDSP20132 328 aa18.74■□□□□ 0.59
SLC39A1-204ENST00000368623 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
SLC39A1-204ENST00000368623 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
SLC39A1-204ENST00000368623 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
SLC39A1-204ENST00000368623 K7ELQ4 463 aaPredicted RBP18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 KCNA6P17658 529 aa18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 PTPRCP08575 1304 aa18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 ARHGEF10O15013 1369 aa18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
SLC39A1-204ENST00000368623 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
SLC39A1-204ENST00000368623 TTC21AQ8NDW8 1320 aa18.72■□□□□ 0.59
SLC39A1-204ENST00000368623 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
SLC39A1-204ENST00000368623 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 SSFA2P28290 1259 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 CLCN1P35523 988 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 FKBP5Q13451 457 aaPredicted RBP18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 TBX22Q9Y458 520 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 ZBTB7CA1YPR0 619 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 ABTB2Q8N961 1025 aa18.7■□□□□ 0.58
SLC39A1-204ENST00000368623 KDRP35968 1356 aa18.69■□□□□ 0.58
SLC39A1-204ENST00000368623 HOXC9P31274 260 aa18.69■□□□□ 0.58
SLC39A1-204ENST00000368623 HSP90AA2PQ14568 343 aaPredicted RBP18.69■□□□□ 0.58
SLC39A1-204ENST00000368623 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
SLC39A1-204ENST00000368623 MRE11P49959 708 aa18.68■□□□□ 0.58
SLC39A1-204ENST00000368623 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
SLC39A1-204ENST00000368623 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
SLC39A1-204ENST00000368623 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
SLC39A1-204ENST00000368623 PIK3C2AO00443 1686 aa18.68■□□□□ 0.58
SLC39A1-204ENST00000368623 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
SLC39A1-204ENST00000368623 DDX11L8A8MPP1 907 aa18.67■□□□□ 0.58
SLC39A1-204ENST00000368623 ESPNB1AK53 854 aa18.67■□□□□ 0.58
SLC39A1-204ENST00000368623 FLIIQ13045 1269 aa18.67■□□□□ 0.58
SLC39A1-204ENST00000368623 SETD1BQ9UPS6 1966 aaKnown RBP18.67■□□□□ 0.58
SLC39A1-204ENST00000368623 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
SLC39A1-204ENST00000368623 GNAT3A8MTJ3 354 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms