RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 DTNBO60941 627 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 SPC24Q8NBT2 197 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 FANCAO15360 1455 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
RPGR-202ENST00000339363 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 NPHP1O15259 732 aa11.25□□□□□ -0.61
RPGR-202ENST00000339363 LRSAM1Q6UWE0 723 aa11.25□□□□□ -0.61
RPGR-202ENST00000339363 FEZ1Q99689 392 aa11.25□□□□□ -0.61
RPGR-202ENST00000339363 TMX1Q9H3N1 280 aa11.25□□□□□ -0.61
RPGR-202ENST00000339363 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
RPGR-202ENST00000339363 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
RPGR-202ENST00000339363 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
RPGR-202ENST00000339363 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
RPGR-202ENST00000339363 KIF16BQ96L93 1317 aa11.25□□□□□ -0.61
RPGR-202ENST00000339363 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
RPGR-202ENST00000339363 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
RPGR-202ENST00000339363 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
RPGR-202ENST00000339363 NCKAP5LQ9HCH0 1330 aa11.24□□□□□ -0.61
RPGR-202ENST00000339363 EFCAB6Q5THR3 1501 aa11.24□□□□□ -0.61
RPGR-202ENST00000339363 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
RPGR-202ENST00000339363 TEX2Q8IWB9 1127 aa11.24□□□□□ -0.61
RPGR-202ENST00000339363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPGR-202ENST00000339363 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
RPGR-202ENST00000339363 SBNO2Q9Y2G9 1366 aa11.24□□□□□ -0.61
RPGR-202ENST00000339363 KIF1BO60333 1816 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 CD163L1Q9NR16 1453 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 APBB1O00213 710 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 PHF14O94880 888 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 ADGRB3O60242 1522 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
RPGR-202ENST00000339363 DDX19BQ9UMR2 479 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
RPGR-202ENST00000339363 PIBF1Q8WXW3 757 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 SNX21Q969T3 373 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 TSPYL1Q9H0U9 437 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
RPGR-202ENST00000339363 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
RPGR-202ENST00000339363 PDLIM2Q96JY6 352 aa11.22□□□□□ -0.61
RPGR-202ENST00000339363 SMARCA5O60264 1052 aaPredicted RBP11.22□□□□□ -0.61
RPGR-202ENST00000339363 GTF2F1P35269 517 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPGR-202ENST00000339363 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
RPGR-202ENST00000339363 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
RPGR-202ENST00000339363 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
RPGR-202ENST00000339363 MBD3O95983 291 aa11.22□□□□□ -0.61
RPGR-202ENST00000339363 PRKAR2BP31323 418 aa11.22□□□□□ -0.61
RPGR-202ENST00000339363 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.61
RPGR-202ENST00000339363 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 GPATCH11Q8N954 259 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 VAMP4O75379 141 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 CFAP53Q96M91 514 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 EMILIN1Q9Y6C2 1016 aa11.21□□□□□ -0.61
RPGR-202ENST00000339363 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.62
RPGR-202ENST00000339363 ADCY5O95622 1261 aa11.21□□□□□ -0.62
RPGR-202ENST00000339363 KRT222Q8N1A0 295 aa11.21□□□□□ -0.62
RPGR-202ENST00000339363 NGEFQ8N5V2 710 aa11.21□□□□□ -0.62
RPGR-202ENST00000339363 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 ZDHHC9Q9Y397 364 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 PPLO60437 1756 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 ST18O60284 1047 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 RAPGEF3O95398 923 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 TOMM22Q9NS69 142 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 GTF2A1P52655 376 aaPredicted RBP11.2□□□□□ -0.62
RPGR-202ENST00000339363 C16orf45Q96MC5 204 aaPredicted RBP11.2□□□□□ -0.62
RPGR-202ENST00000339363 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 LMBRD1Q9NUN5 540 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
RPGR-202ENST00000339363 IDI1Q13907 227 aa11.19□□□□□ -0.62
RPGR-202ENST00000339363 TMEM63CQ9P1W3 806 aa11.19□□□□□ -0.62
RPGR-202ENST00000339363 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
RPGR-202ENST00000339363 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
RPGR-202ENST00000339363 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
RPGR-202ENST00000339363 FRMPD1Q5SYB0 1578 aa11.19□□□□□ -0.62
RPGR-202ENST00000339363 ZMYM3Q14202 1370 aa11.19□□□□□ -0.62
RPGR-202ENST00000339363 ARHGEF28Q8N1W1 1705 aaKnown RBP11.19□□□□□ -0.62
RPGR-202ENST00000339363 LRRC7Q96NW7 1537 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 BMP2KLQ5H9B9 411 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
RPGR-202ENST00000339363 GPT2Q8TD30 523 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 POLKQ9UBT6 870 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPGR-202ENST00000339363 RSPH14Q9UHP6 348 aa11.18□□□□□ -0.62
RPGR-202ENST00000339363 V9GYY5 206 aaPredicted RBP11.18□□□□□ -0.62
RPGR-202ENST00000339363 PLEKHM2Q8IWE5 1019 aa11.17□□□□□ -0.62
RPGR-202ENST00000339363 EVC2Q86UK5 1308 aa11.17□□□□□ -0.62
RPGR-202ENST00000339363 TEX35Q5T0J7 233 aa11.17□□□□□ -0.62
RPGR-202ENST00000339363 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
RPGR-202ENST00000339363 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
RPGR-202ENST00000339363 TPD52L1Q16890 204 aaPredicted RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 GDPD2Q9HCC8 539 aa11.16□□□□□ -0.62
RPGR-202ENST00000339363 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
RPGR-202ENST00000339363 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
RPGR-202ENST00000339363 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms