RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 CLSTN1O94985 981 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 HECW2Q9P2P5 1572 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 SLC3A2P08195 630 aaKnown RBP13.57□□□□□ -0.24
POLR1B-202ENST00000333990 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 SSH1Q8WYL5 1049 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 DNAJC2Q99543 621 aaKnown RBP13.57□□□□□ -0.24
POLR1B-202ENST00000333990 PTPRCP08575 1304 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 RARSP54136 660 aaKnown RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 KDM5DQ9BY66 1539 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 PPP1R1BQ9UD71 204 aaPredicted RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 A0A1W2PP64 1363 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 RAD21O60216 631 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
POLR1B-202ENST00000333990 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
POLR1B-202ENST00000333990 DDB1Q16531 1140 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 IL2RBP14784 551 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
POLR1B-202ENST00000333990 SIL1Q9H173 461 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
POLR1B-202ENST00000333990 PHF14O94880 888 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 C22orf23Q9BZE7 217 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
POLR1B-202ENST00000333990 TSPOAP1O95153 1857 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 A0A087WZG4 1122 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 IP6K1Q92551 441 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
POLR1B-202ENST00000333990 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
POLR1B-202ENST00000333990 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 ARHGEF10O15013 1369 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 COL17A1Q9UMD9 1497 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-202ENST00000333990 EFCAB6Q5THR3 1501 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 LTKP29376 864 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 DDX11L8A8MPP1 907 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 FLIIQ13045 1269 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
POLR1B-202ENST00000333990 MYD88Q99836 296 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 NLRP1Q9C000 1473 aa13.53□□□□□ -0.24
POLR1B-202ENST00000333990 PLEKHG3A1L390 1219 aa13.52□□□□□ -0.24
POLR1B-202ENST00000333990 RAB11FIP3O75154 756 aa13.52□□□□□ -0.24
POLR1B-202ENST00000333990 MCTP1Q6DN14 999 aa13.52□□□□□ -0.25
POLR1B-202ENST00000333990 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
POLR1B-202ENST00000333990 AK7Q96M32 723 aa13.52□□□□□ -0.25
POLR1B-202ENST00000333990 PIK3R4Q99570 1358 aa13.52□□□□□ -0.25
POLR1B-202ENST00000333990 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
POLR1B-202ENST00000333990 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
POLR1B-202ENST00000333990 AACSQ86V21 672 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 MCM2P49736 904 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 FBLN1P23142 703 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 CHD1LQ86WJ1 897 aa13.51□□□□□ -0.25
POLR1B-202ENST00000333990 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
POLR1B-202ENST00000333990 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 IFIT1P09914 478 aaKnown RBP13.5□□□□□ -0.25
POLR1B-202ENST00000333990 XBP1P17861 261 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 IFIT5Q13325 482 aaKnown RBP13.5□□□□□ -0.25
POLR1B-202ENST00000333990 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 MBIPQ9NS73 344 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 TCEAL9Q9UHQ7 104 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 SBNO2Q9Y2G9 1366 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
POLR1B-202ENST00000333990 HOXC9P31274 260 aa13.49□□□□□ -0.25
POLR1B-202ENST00000333990 NUCB2P80303 420 aa13.49□□□□□ -0.25
POLR1B-202ENST00000333990 DCAF5Q96JK2 942 aa13.49□□□□□ -0.25
POLR1B-202ENST00000333990 PPP1R42Q7Z4L9 355 aa13.48□□□□□ -0.25
POLR1B-202ENST00000333990 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
POLR1B-202ENST00000333990 FAM83GA6ND36 823 aa13.48□□□□□ -0.25
POLR1B-202ENST00000333990 ARHGAP45Q92619 1136 aa13.48□□□□□ -0.25
POLR1B-202ENST00000333990 EYA1Q99502 592 aa13.48□□□□□ -0.25
POLR1B-202ENST00000333990 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
POLR1B-202ENST00000333990 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
POLR1B-202ENST00000333990 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 CAVIN4Q5BKX8 364 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 ZBTB3Q9H5J0 574 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 BRMS1Q9HCU9 246 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms