RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 HECW2Q9P2P5 1572 aa16.49■□□□□ 0.23
PRKD1-201ENST00000331968 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
PRKD1-201ENST00000331968 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
PRKD1-201ENST00000331968 TNPO1Q92973 898 aaKnown RBP16.49■□□□□ 0.23
PRKD1-201ENST00000331968 UNC13BO14795 1591 aa16.49■□□□□ 0.23
PRKD1-201ENST00000331968 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 KIAA1211Q6ZU35 1233 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
PRKD1-201ENST00000331968 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
PRKD1-201ENST00000331968 RNF17Q9BXT8 1623 aaKnown RBP16.48■□□□□ 0.23
PRKD1-201ENST00000331968 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 SRGAP3O43295 1099 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 ANKRD24Q8TF21 1146 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
PRKD1-201ENST00000331968 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
PRKD1-201ENST00000331968 LRRFIP2Q9Y608 721 aaKnown RBP16.47■□□□□ 0.23
PRKD1-201ENST00000331968 KIF1BO60333 1816 aa16.47■□□□□ 0.23
PRKD1-201ENST00000331968 KCNQ3O43525 872 aa16.47■□□□□ 0.23
PRKD1-201ENST00000331968 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
PRKD1-201ENST00000331968 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
PRKD1-201ENST00000331968 TBX22Q9Y458 520 aa16.47■□□□□ 0.23
PRKD1-201ENST00000331968 GCP02774 474 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 FLIIQ13045 1269 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 TAF7LQ5H9L4 462 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 NSD2O96028 1365 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 GNAI2P04899 355 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
PRKD1-201ENST00000331968 GORABQ5T7V8 394 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 TET3O43151 1660 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
PRKD1-201ENST00000331968 HOXC9P31274 260 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 ABCA9Q8IUA7 1624 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
PRKD1-201ENST00000331968 ZMYM4Q5VZL5 1548 aa16.44■□□□□ 0.22
PRKD1-201ENST00000331968 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
PRKD1-201ENST00000331968 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
PRKD1-201ENST00000331968 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
PRKD1-201ENST00000331968 NEXNQ0ZGT2 675 aa16.44■□□□□ 0.22
PRKD1-201ENST00000331968 SRCIN1Q9C0H9 1055 aa16.44■□□□□ 0.22
PRKD1-201ENST00000331968 USP19O94966 1318 aa16.43■□□□□ 0.22
PRKD1-201ENST00000331968 CABP4P57796 275 aa16.43■□□□□ 0.22
PRKD1-201ENST00000331968 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
PRKD1-201ENST00000331968 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
PRKD1-201ENST00000331968 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
PRKD1-201ENST00000331968 KDM5AP29375 1690 aaKnown RBP16.42■□□□□ 0.22
PRKD1-201ENST00000331968 NPC1L1Q9UHC9 1359 aa16.42■□□□□ 0.22
PRKD1-201ENST00000331968 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
PRKD1-201ENST00000331968 FOSBP53539 338 aa16.42■□□□□ 0.22
PRKD1-201ENST00000331968 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
PRKD1-201ENST00000331968 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 ST18O60284 1047 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 KDM4AO75164 1064 aa16.41■□□□□ 0.22
PRKD1-201ENST00000331968 UPF3BQ9BZI7 483 aaKnown RBP16.4■□□□□ 0.22
PRKD1-201ENST00000331968 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
PRKD1-201ENST00000331968 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
PRKD1-201ENST00000331968 NEK4P51957 841 aa16.4■□□□□ 0.22
PRKD1-201ENST00000331968 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
PRKD1-201ENST00000331968 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
PRKD1-201ENST00000331968 CWF19L2Q2TBE0 894 aaKnown RBP16.39■□□□□ 0.21
PRKD1-201ENST00000331968 GNAI3P08754 354 aa16.39■□□□□ 0.21
PRKD1-201ENST00000331968 MCCP23508 829 aa16.39■□□□□ 0.21
PRKD1-201ENST00000331968 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
PRKD1-201ENST00000331968 MYOM2P54296 1465 aa16.39■□□□□ 0.21
PRKD1-201ENST00000331968 SBNO2Q9Y2G9 1366 aa16.39■□□□□ 0.21
PRKD1-201ENST00000331968 K7ELQ4 463 aaPredicted RBP16.39■□□□□ 0.21
PRKD1-201ENST00000331968 CDC45O75419 566 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
PRKD1-201ENST00000331968 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
PRKD1-201ENST00000331968 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
PRKD1-201ENST00000331968 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
PRKD1-201ENST00000331968 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
PRKD1-201ENST00000331968 CCDC8Q9H0W5 538 aaPredicted RBP16.37■□□□□ 0.21
PRKD1-201ENST00000331968 ZBTB3Q9H5J0 574 aa16.37■□□□□ 0.21
PRKD1-201ENST00000331968 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
PRKD1-201ENST00000331968 A2ML1A8K2U0 1454 aa16.37■□□□□ 0.21
PRKD1-201ENST00000331968 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
PRKD1-201ENST00000331968 DNAJC2Q99543 621 aaKnown RBP16.37■□□□□ 0.21
PRKD1-201ENST00000331968 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
PRKD1-201ENST00000331968 CWC27Q6UX04 472 aaKnown RBP16.36■□□□□ 0.21
PRKD1-201ENST00000331968 SYCE3A1L190 88 aa16.36■□□□□ 0.21
PRKD1-201ENST00000331968 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
PRKD1-201ENST00000331968 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
PRKD1-201ENST00000331968 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
PRKD1-201ENST00000331968 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms