RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
MUC4-201ENST00000308466 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
MUC4-201ENST00000308466 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
MUC4-201ENST00000308466 ZFYVE9O95405 1425 aa13.08□□□□□ -0.32
MUC4-201ENST00000308466 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
MUC4-201ENST00000308466 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
MUC4-201ENST00000308466 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
MUC4-201ENST00000308466 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
MUC4-201ENST00000308466 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
MUC4-201ENST00000308466 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 LTKP29376 864 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 RABEP1Q15276 862 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 LRRCC1Q9C099 1032 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
MUC4-201ENST00000308466 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
MUC4-201ENST00000308466 KIDINS220Q9ULH0 1771 aa13.05□□□□□ -0.32
MUC4-201ENST00000308466 PTMSP20962 102 aa13.05□□□□□ -0.32
MUC4-201ENST00000308466 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
MUC4-201ENST00000308466 SKOR2Q2VWA4 1001 aaPredicted RBP13.05□□□□□ -0.32
MUC4-201ENST00000308466 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
MUC4-201ENST00000308466 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
MUC4-201ENST00000308466 G2E3Q7L622 706 aa13.05□□□□□ -0.32
MUC4-201ENST00000308466 EYA1Q99502 592 aa13.05□□□□□ -0.32
MUC4-201ENST00000308466 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
MUC4-201ENST00000308466 ERC2O15083 957 aa13.04□□□□□ -0.32
MUC4-201ENST00000308466 FLIIQ13045 1269 aa13.04□□□□□ -0.32
MUC4-201ENST00000308466 ANXA1P04083 346 aa13.04□□□□□ -0.32
MUC4-201ENST00000308466 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
MUC4-201ENST00000308466 NUCB2P80303 420 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
MUC4-201ENST00000308466 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 GLI2P10070 1586 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
MUC4-201ENST00000308466 DIAPH3Q9NSV4 1193 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 USP19O94966 1318 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
MUC4-201ENST00000308466 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
MUC4-201ENST00000308466 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.32
MUC4-201ENST00000308466 SDSP20132 328 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 CFAP74Q9C0B2 1584 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 IFIT2P09913 472 aaKnown RBP13.02□□□□□ -0.33
MUC4-201ENST00000308466 SSFA2P28290 1259 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
MUC4-201ENST00000308466 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
MUC4-201ENST00000308466 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 PTPRCP08575 1304 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
MUC4-201ENST00000308466 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 KCNA6P17658 529 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 ARHGAP31Q2M1Z3 1444 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 CHL1O00533 1208 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 MSNP26038 577 aaKnown RBP13.01□□□□□ -0.33
MUC4-201ENST00000308466 DNTTIP2Q5QJE6 756 aaKnown RBP13.01□□□□□ -0.33
MUC4-201ENST00000308466 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
MUC4-201ENST00000308466 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 QRICH2Q9H0J4 1663 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 PRPF40AO75400 957 aaKnown RBP13.01□□□□□ -0.33
MUC4-201ENST00000308466 CAVIN1Q6NZI2 390 aaKnown RBP13.01□□□□□ -0.33
MUC4-201ENST00000308466 CEP85Q6P2H3 762 aa13.01□□□□□ -0.33
MUC4-201ENST00000308466 MRE11P49959 708 aa13□□□□□ -0.33
MUC4-201ENST00000308466 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
MUC4-201ENST00000308466 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
MUC4-201ENST00000308466 BTBD11A6QL63 1104 aa13□□□□□ -0.33
MUC4-201ENST00000308466 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
MUC4-201ENST00000308466 MX1P20591 662 aa12.99□□□□□ -0.33
MUC4-201ENST00000308466 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
MUC4-201ENST00000308466 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
MUC4-201ENST00000308466 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
MUC4-201ENST00000308466 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
MUC4-201ENST00000308466 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
MUC4-201ENST00000308466 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
MUC4-201ENST00000308466 GOLGA6L4A6NEF3 574 aa12.98□□□□□ -0.33
MUC4-201ENST00000308466 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
MUC4-201ENST00000308466 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
MUC4-201ENST00000308466 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
MUC4-201ENST00000308466 SIL1Q9H173 461 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 VGLL3A8MV65 326 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 MYL6BP14649 208 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 GRPEL1Q9HAV7 217 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 ROBO2Q9HCK4 1378 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
MUC4-201ENST00000308466 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
MUC4-201ENST00000308466 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
MUC4-201ENST00000308466 PDE1AP54750 535 aa12.96□□□□□ -0.33
MUC4-201ENST00000308466 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
MUC4-201ENST00000308466 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms