RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
NKRF-201ENST00000304449 GSPT1P15170 499 aaKnown RBP9.83□□□□□ -0.84
NKRF-201ENST00000304449 TBC1D9Q6ZT07 1266 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
NKRF-201ENST00000304449 JARID2Q92833 1246 aaPredicted RBP9.83□□□□□ -0.84
NKRF-201ENST00000304449 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.83□□□□□ -0.84
NKRF-201ENST00000304449 OFD1O75665 1012 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 SSFA2P28290 1259 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 GNAI1P63096 354 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 CAVIN1Q6NZI2 390 aaKnown RBP9.83□□□□□ -0.84
NKRF-201ENST00000304449 TSC1Q92574 1164 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 ZRANB1Q9UGI0 708 aa9.83□□□□□ -0.84
NKRF-201ENST00000304449 CCDC173Q0VFZ6 552 aa9.82□□□□□ -0.84
NKRF-201ENST00000304449 RBM42Q9BTD8 480 aaKnown RBP9.82□□□□□ -0.84
NKRF-201ENST00000304449 GOLGA6L22H0YM25 854 aa9.82□□□□□ -0.84
NKRF-201ENST00000304449 WASLO00401 505 aaPredicted RBP9.82□□□□□ -0.84
NKRF-201ENST00000304449 HMOX1P09601 288 aa9.82□□□□□ -0.84
NKRF-201ENST00000304449 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
NKRF-201ENST00000304449 NME9Q86XW9 330 aa9.82□□□□□ -0.84
NKRF-201ENST00000304449 FOXD4L4Q8WXT5 416 aaPredicted RBP9.82□□□□□ -0.84
NKRF-201ENST00000304449 INTS3Q68E01 1043 aaKnown RBP9.81□□□□□ -0.84
NKRF-201ENST00000304449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.81□□□□□ -0.84
NKRF-201ENST00000304449 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 FAM177BA6PVY3 158 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 RNF214Q8ND24 703 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 DCTPP1Q9H773 170 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 OVOS2A0A0J9YW53 1432 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 OVOS2Q6IE36 1432 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 MCTP1Q6DN14 999 aa9.81□□□□□ -0.84
NKRF-201ENST00000304449 N4BP2Q86UW6 1770 aaPredicted RBP9.8□□□□□ -0.84
NKRF-201ENST00000304449 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
NKRF-201ENST00000304449 ANKRD45Q5TZF3 282 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 SSH2Q76I76 1423 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 UBR1Q8IWV7 1749 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 LRRC37A3O60309 1634 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 PTMAP06454 111 aaKnown RBP9.8□□□□□ -0.84
NKRF-201ENST00000304449 ISY1Q9ULR0 285 aaKnown RBP9.8□□□□□ -0.84
NKRF-201ENST00000304449 CRB1P82279 1406 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 PRR36Q9H6K5 1346 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 FAM83GA6ND36 823 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 IGSF3O75054 1194 aa9.8□□□□□ -0.84
NKRF-201ENST00000304449 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
NKRF-201ENST00000304449 CYP2E1P05181 493 aaPredicted RBP9.79□□□□□ -0.84
NKRF-201ENST00000304449 CBX1P83916 185 aa9.79□□□□□ -0.84
NKRF-201ENST00000304449 NCKAP5LQ9HCH0 1330 aa9.79□□□□□ -0.84
NKRF-201ENST00000304449 CHMP4BQ9H444 224 aaKnown RBP9.79□□□□□ -0.84
NKRF-201ENST00000304449 KIAA0232Q92628 1395 aa9.79□□□□□ -0.84
NKRF-201ENST00000304449 K7ELQ4 463 aaPredicted RBP9.78□□□□□ -0.84
NKRF-201ENST00000304449 SKOR2Q2VWA4 1001 aaPredicted RBP9.78□□□□□ -0.84
NKRF-201ENST00000304449 GAS2L2Q8NHY3 880 aa9.78□□□□□ -0.84
NKRF-201ENST00000304449 CHAMP1Q96JM3 812 aa9.78□□□□□ -0.84
NKRF-201ENST00000304449 CHL1O00533 1208 aa9.78□□□□□ -0.84
NKRF-201ENST00000304449 USP31Q70CQ4 1352 aa9.78□□□□□ -0.84
NKRF-201ENST00000304449 MARF1Q9Y4F3 1742 aaKnown RBP9.78□□□□□ -0.84
NKRF-201ENST00000304449 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
NKRF-201ENST00000304449 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
NKRF-201ENST00000304449 XRN1Q8IZH2 1706 aaKnown RBP9.77□□□□□ -0.84
NKRF-201ENST00000304449 RTL1A6NKG5 1358 aa9.77□□□□□ -0.85
NKRF-201ENST00000304449 FGD1P98174 961 aa9.77□□□□□ -0.85
NKRF-201ENST00000304449 MAPK8IP2Q13387 824 aaPredicted RBP9.77□□□□□ -0.85
NKRF-201ENST00000304449 TTC22Q5TAA0 569 aa9.77□□□□□ -0.85
NKRF-201ENST00000304449 ANKRD44Q8N8A2 993 aa9.77□□□□□ -0.85
NKRF-201ENST00000304449 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
NKRF-201ENST00000304449 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
NKRF-201ENST00000304449 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.85
NKRF-201ENST00000304449 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.85
NKRF-201ENST00000304449 USP26Q9BXU7 913 aa9.77□□□□□ -0.85
NKRF-201ENST00000304449 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.85
NKRF-201ENST00000304449 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
NKRF-201ENST00000304449 RRS1Q15050 365 aaKnown RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 CDC45O75419 566 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 LMOD3Q0VAK6 560 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 DCTN1Q14203 1278 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 BBXQ8WY36 941 aaPredicted RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 USP54Q70EL1 1684 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 FAM208AQ9UK61 1670 aaKnown RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 ELL2O00472 640 aaPredicted RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 EIF4A2Q14240 407 aaKnown RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 CEP85Q6P2H3 762 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 C16orf71Q8IYS4 520 aaPredicted RBP9.76□□□□□ -0.85
NKRF-201ENST00000304449 MAP7D2Q96T17 732 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 CCDC61Q9Y6R9 512 aa9.76□□□□□ -0.85
NKRF-201ENST00000304449 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
NKRF-201ENST00000304449 AK9Q5TCS8 1911 aa9.75□□□□□ -0.85
NKRF-201ENST00000304449 SALL3Q9BXA9 1300 aa9.75□□□□□ -0.85
NKRF-201ENST00000304449 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
NKRF-201ENST00000304449 AEBP1Q8IUX7 1158 aa9.75□□□□□ -0.85
NKRF-201ENST00000304449 TSPOAP1O95153 1857 aa9.75□□□□□ -0.85
NKRF-201ENST00000304449 MSH6P52701 1360 aa9.75□□□□□ -0.85
NKRF-201ENST00000304449 KRT24Q2M2I5 525 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
NKRF-201ENST00000304449 PPP1R9BQ96SB3 815 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 BCL11BQ9C0K0 894 aaPredicted RBP9.74□□□□□ -0.85
NKRF-201ENST00000304449 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
NKRF-201ENST00000304449 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms