RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ZNF428Q96B54 188 aa18.05■□□□□ 0.48
RAB40A-201ENST00000304236 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
RAB40A-201ENST00000304236 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
RAB40A-201ENST00000304236 PLCH1Q4KWH8 1693 aa18.05■□□□□ 0.48
RAB40A-201ENST00000304236 ONECUT3O60422 494 aaPredicted RBP18.04■□□□□ 0.48
RAB40A-201ENST00000304236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAB40A-201ENST00000304236 BTG4Q9NY30 223 aa18.04■□□□□ 0.48
RAB40A-201ENST00000304236 DDX19BQ9UMR2 479 aa18.04■□□□□ 0.48
RAB40A-201ENST00000304236 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
RAB40A-201ENST00000304236 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
RAB40A-201ENST00000304236 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
RAB40A-201ENST00000304236 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
RAB40A-201ENST00000304236 SSH1Q8WYL5 1049 aa18.04■□□□□ 0.48
RAB40A-201ENST00000304236 AATKQ6ZMQ8 1374 aa18.04■□□□□ 0.48
RAB40A-201ENST00000304236 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
RAB40A-201ENST00000304236 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
RAB40A-201ENST00000304236 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
RAB40A-201ENST00000304236 KIF16BQ96L93 1317 aa18.03■□□□□ 0.48
RAB40A-201ENST00000304236 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
RAB40A-201ENST00000304236 PLEKHG3A1L390 1219 aa18.02■□□□□ 0.47
RAB40A-201ENST00000304236 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.47
RAB40A-201ENST00000304236 ACEP12821 1306 aa18.02■□□□□ 0.47
RAB40A-201ENST00000304236 TRIM27P14373 513 aa18.01■□□□□ 0.47
RAB40A-201ENST00000304236 A0A0G2JS52 829 aa18■□□□□ 0.47
RAB40A-201ENST00000304236 PRKAR2BP31323 418 aa18■□□□□ 0.47
RAB40A-201ENST00000304236 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
RAB40A-201ENST00000304236 NFE2L2Q16236 605 aa18■□□□□ 0.47
RAB40A-201ENST00000304236 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
RAB40A-201ENST00000304236 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
RAB40A-201ENST00000304236 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
RAB40A-201ENST00000304236 COL14A1Q05707 1796 aaKnown RBP18■□□□□ 0.47
RAB40A-201ENST00000304236 BRPF1P55201 1214 aaPredicted RBP18■□□□□ 0.47
RAB40A-201ENST00000304236 SF3B2Q13435 895 aaKnown RBP17.99■□□□□ 0.47
RAB40A-201ENST00000304236 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
RAB40A-201ENST00000304236 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
RAB40A-201ENST00000304236 AKAP12Q02952 1782 aa17.98■□□□□ 0.47
RAB40A-201ENST00000304236 FAM98CQ17RN3 349 aaKnown RBP17.98■□□□□ 0.47
RAB40A-201ENST00000304236 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
RAB40A-201ENST00000304236 USP19O94966 1318 aa17.98■□□□□ 0.47
RAB40A-201ENST00000304236 IL13P35225 146 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 COG3Q96JB2 828 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 UPF2Q9HAU5 1272 aaKnown RBP17.97■□□□□ 0.47
RAB40A-201ENST00000304236 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
RAB40A-201ENST00000304236 SPATA31A5Q5VU36 1347 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 SPATA31A7Q8IWB4 1347 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 NRAPQ86VF7 1730 aa17.97■□□□□ 0.47
RAB40A-201ENST00000304236 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
RAB40A-201ENST00000304236 TOPAZ1Q8N9V7 1692 aa17.96■□□□□ 0.47
RAB40A-201ENST00000304236 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
RAB40A-201ENST00000304236 ABTB2Q8N961 1025 aa17.96■□□□□ 0.47
RAB40A-201ENST00000304236 KIAA0232Q92628 1395 aa17.96■□□□□ 0.47
RAB40A-201ENST00000304236 CRYBG1Q9Y4K1 1723 aa17.96■□□□□ 0.46
RAB40A-201ENST00000304236 GNAI1P63096 354 aa17.95■□□□□ 0.46
RAB40A-201ENST00000304236 BECN1Q14457 450 aa17.95■□□□□ 0.46
RAB40A-201ENST00000304236 NME9Q86XW9 330 aa17.95■□□□□ 0.46
RAB40A-201ENST00000304236 SLC4A3P48751 1232 aa17.95■□□□□ 0.46
RAB40A-201ENST00000304236 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
RAB40A-201ENST00000304236 CHRNA2Q15822 529 aa17.95■□□□□ 0.46
RAB40A-201ENST00000304236 IFT57Q9NWB7 429 aa17.95■□□□□ 0.46
RAB40A-201ENST00000304236 EMILIN1Q9Y6C2 1016 aa17.94■□□□□ 0.46
RAB40A-201ENST00000304236 TMEM57Q8N5G2 664 aa17.93■□□□□ 0.46
RAB40A-201ENST00000304236 ARHGAP45Q92619 1136 aa17.93■□□□□ 0.46
RAB40A-201ENST00000304236 ZBTB40Q9NUA8 1239 aa17.93■□□□□ 0.46
RAB40A-201ENST00000304236 HMOX1P09601 288 aa17.92■□□□□ 0.46
RAB40A-201ENST00000304236 FBLN1P23142 703 aa17.92■□□□□ 0.46
RAB40A-201ENST00000304236 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
RAB40A-201ENST00000304236 SMC5Q8IY18 1101 aa17.92■□□□□ 0.46
RAB40A-201ENST00000304236 PHACTR3Q96KR7 559 aa17.92■□□□□ 0.46
RAB40A-201ENST00000304236 STRN4Q9NRL3 753 aa17.92■□□□□ 0.46
RAB40A-201ENST00000304236 SEC24BO95487 1268 aa17.91■□□□□ 0.46
RAB40A-201ENST00000304236 NFKBIBQ15653 356 aa17.91■□□□□ 0.46
RAB40A-201ENST00000304236 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
RAB40A-201ENST00000304236 SPATA31A1Q5TZJ5 1347 aa17.9■□□□□ 0.46
RAB40A-201ENST00000304236 EVA1CP58658 441 aa17.9■□□□□ 0.46
RAB40A-201ENST00000304236 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
RAB40A-201ENST00000304236 EP400Q96L91 3159 aa17.9■□□□□ 0.46
RAB40A-201ENST00000304236 VAMP4O75379 141 aa17.9■□□□□ 0.46
RAB40A-201ENST00000304236 TBC1D32Q96NH3 1257 aa17.89■□□□□ 0.45
RAB40A-201ENST00000304236 BAG6P46379 1132 aa17.88■□□□□ 0.45
RAB40A-201ENST00000304236 MRPL50Q8N5N7 158 aaKnown RBP17.88■□□□□ 0.45
RAB40A-201ENST00000304236 CPDO75976 1380 aa17.88■□□□□ 0.45
RAB40A-201ENST00000304236 GCP02774 474 aa17.88■□□□□ 0.45
RAB40A-201ENST00000304236 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
RAB40A-201ENST00000304236 NRKQ7Z2Y5 1582 aa17.87■□□□□ 0.45
RAB40A-201ENST00000304236 DLG5Q8TDM6 1919 aa17.87■□□□□ 0.45
RAB40A-201ENST00000304236 USP6P35125 1406 aa17.86■□□□□ 0.45
RAB40A-201ENST00000304236 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
RAB40A-201ENST00000304236 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
RAB40A-201ENST00000304236 NLRP6P59044 892 aa17.85■□□□□ 0.45
RAB40A-201ENST00000304236 RRS1Q15050 365 aaKnown RBP17.85■□□□□ 0.45
RAB40A-201ENST00000304236 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
RAB40A-201ENST00000304236 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
RAB40A-201ENST00000304236 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
RAB40A-201ENST00000304236 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
RAB40A-201ENST00000304236 NUCB1Q02818 461 aa17.84■□□□□ 0.45
RAB40A-201ENST00000304236 LARP1Q6PKG0 1096 aaKnown RBP17.83■□□□□ 0.44
RAB40A-201ENST00000304236 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
RAB40A-201ENST00000304236 API5Q9BZZ5 524 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms