RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
CCDC116-201ENST00000292779 ORAI2Q96SN7 254 aa18.94■□□□□ 0.62
CCDC116-201ENST00000292779 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
CCDC116-201ENST00000292779 USP31Q70CQ4 1352 aa18.94■□□□□ 0.62
CCDC116-201ENST00000292779 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
CCDC116-201ENST00000292779 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
CCDC116-201ENST00000292779 API5Q9BZZ5 524 aaKnown RBP18.93■□□□□ 0.62
CCDC116-201ENST00000292779 ANKRD45Q5TZF3 282 aa18.92■□□□□ 0.62
CCDC116-201ENST00000292779 SIRT2Q8IXJ6 389 aa18.92■□□□□ 0.62
CCDC116-201ENST00000292779 NGDNQ8NEJ9 315 aaKnown RBP18.92■□□□□ 0.62
CCDC116-201ENST00000292779 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
CCDC116-201ENST00000292779 ESCO1Q5FWF5 840 aa18.9■□□□□ 0.62
CCDC116-201ENST00000292779 MCM10Q7L590 875 aa18.9■□□□□ 0.62
CCDC116-201ENST00000292779 PHF8Q9UPP1 1060 aa18.9■□□□□ 0.62
CCDC116-201ENST00000292779 MAP3K19Q56UN5 1328 aa18.9■□□□□ 0.62
CCDC116-201ENST00000292779 TTC21AQ8NDW8 1320 aa18.9■□□□□ 0.62
CCDC116-201ENST00000292779 KRT24Q2M2I5 525 aa18.89■□□□□ 0.61
CCDC116-201ENST00000292779 C19orf44Q9H6X5 657 aa18.89■□□□□ 0.61
CCDC116-201ENST00000292779 PIK3C2AO00443 1686 aa18.89■□□□□ 0.61
CCDC116-201ENST00000292779 MARF1Q9Y4F3 1742 aaKnown RBP18.89■□□□□ 0.61
CCDC116-201ENST00000292779 CHL1O00533 1208 aa18.88■□□□□ 0.61
CCDC116-201ENST00000292779 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
CCDC116-201ENST00000292779 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
CCDC116-201ENST00000292779 SPRYD3Q8NCJ5 442 aa18.88■□□□□ 0.61
CCDC116-201ENST00000292779 NUTM2GQ5VZR2 741 aa18.87■□□□□ 0.61
CCDC116-201ENST00000292779 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
CCDC116-201ENST00000292779 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
CCDC116-201ENST00000292779 MST1RQ04912 1400 aa18.86■□□□□ 0.61
CCDC116-201ENST00000292779 KIF24Q5T7B8 1368 aa18.86■□□□□ 0.61
CCDC116-201ENST00000292779 FOXO3O43524 673 aa18.85■□□□□ 0.61
CCDC116-201ENST00000292779 FLT4P35916 1363 aa18.84■□□□□ 0.61
CCDC116-201ENST00000292779 RBM25P49756 843 aaKnown RBP18.84■□□□□ 0.61
CCDC116-201ENST00000292779 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
CCDC116-201ENST00000292779 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
CCDC116-201ENST00000292779 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
CCDC116-201ENST00000292779 KIAA0232Q92628 1395 aa18.84■□□□□ 0.61
CCDC116-201ENST00000292779 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
CCDC116-201ENST00000292779 RGS12O14924 1447 aa18.83■□□□□ 0.61
CCDC116-201ENST00000292779 CRB1P82279 1406 aa18.83■□□□□ 0.6
CCDC116-201ENST00000292779 AMPHP49418 695 aa18.83■□□□□ 0.6
CCDC116-201ENST00000292779 IL27Q8NEV9 243 aa18.83■□□□□ 0.6
CCDC116-201ENST00000292779 MTHFSDQ2M296 383 aaKnown RBP18.82■□□□□ 0.6
CCDC116-201ENST00000292779 ATF3P18847 181 aa18.81■□□□□ 0.6
CCDC116-201ENST00000292779 NLRP6P59044 892 aa18.81■□□□□ 0.6
CCDC116-201ENST00000292779 MIS18AQ9NYP9 233 aa18.81■□□□□ 0.6
CCDC116-201ENST00000292779 HSCBQ8IWL3 235 aa18.8■□□□□ 0.6
CCDC116-201ENST00000292779 EYA1Q99502 592 aa18.8■□□□□ 0.6
CCDC116-201ENST00000292779 KDRP35968 1356 aa18.8■□□□□ 0.6
CCDC116-201ENST00000292779 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
CCDC116-201ENST00000292779 TBC1D9Q6ZT07 1266 aa18.79■□□□□ 0.6
CCDC116-201ENST00000292779 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
CCDC116-201ENST00000292779 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
CCDC116-201ENST00000292779 TRPM3Q9HCF6 1732 aaPredicted RBP18.79■□□□□ 0.6
CCDC116-201ENST00000292779 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
CCDC116-201ENST00000292779 PTPRCP08575 1304 aa18.78■□□□□ 0.6
CCDC116-201ENST00000292779 MSH6P52701 1360 aa18.78■□□□□ 0.6
CCDC116-201ENST00000292779 PSME1Q06323 249 aa18.78■□□□□ 0.6
CCDC116-201ENST00000292779 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
CCDC116-201ENST00000292779 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
CCDC116-201ENST00000292779 ANKRD44Q8N8A2 993 aa18.77■□□□□ 0.6
CCDC116-201ENST00000292779 CHMP5Q9NZZ3 219 aa18.77■□□□□ 0.6
CCDC116-201ENST00000292779 DCCP43146 1447 aa18.77■□□□□ 0.6
CCDC116-201ENST00000292779 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
CCDC116-201ENST00000292779 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
CCDC116-201ENST00000292779 PLEKHM2Q8IWE5 1019 aa18.76■□□□□ 0.59
CCDC116-201ENST00000292779 ABTB2Q8N961 1025 aa18.76■□□□□ 0.59
CCDC116-201ENST00000292779 SNX21Q969T3 373 aa18.76■□□□□ 0.59
CCDC116-201ENST00000292779 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
CCDC116-201ENST00000292779 GSPT1P15170 499 aaKnown RBP18.75■□□□□ 0.59
CCDC116-201ENST00000292779 CEP85Q6P2H3 762 aa18.75■□□□□ 0.59
CCDC116-201ENST00000292779 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
CCDC116-201ENST00000292779 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
CCDC116-201ENST00000292779 KIF2CQ99661 725 aa18.75■□□□□ 0.59
CCDC116-201ENST00000292779 RTL1A6NKG5 1358 aa18.75■□□□□ 0.59
CCDC116-201ENST00000292779 HOXC9P31274 260 aa18.75■□□□□ 0.59
CCDC116-201ENST00000292779 KIF1AQ12756 1690 aa18.74■□□□□ 0.59
CCDC116-201ENST00000292779 CDC45O75419 566 aa18.74■□□□□ 0.59
CCDC116-201ENST00000292779 GAS2L2Q8NHY3 880 aa18.74■□□□□ 0.59
CCDC116-201ENST00000292779 MEIS3Q99687 375 aa18.74■□□□□ 0.59
CCDC116-201ENST00000292779 USP54Q70EL1 1684 aa18.74■□□□□ 0.59
CCDC116-201ENST00000292779 KRT28Q7Z3Y7 464 aa18.74■□□□□ 0.59
CCDC116-201ENST00000292779 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
CCDC116-201ENST00000292779 LTBP4Q8N2S1 1624 aa18.73■□□□□ 0.59
CCDC116-201ENST00000292779 MCM4P33991 863 aa18.73■□□□□ 0.59
CCDC116-201ENST00000292779 G2E3Q7L622 706 aa18.72■□□□□ 0.59
CCDC116-201ENST00000292779 BRINP3Q76B58 766 aa18.72■□□□□ 0.59
CCDC116-201ENST00000292779 TTC22Q5TAA0 569 aa18.71■□□□□ 0.59
CCDC116-201ENST00000292779 ALS2Q96Q42 1657 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 DDIT3P35638 169 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 OTUD7AQ8TE49 926 aaPredicted RBP18.7■□□□□ 0.58
CCDC116-201ENST00000292779 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
CCDC116-201ENST00000292779 SLAIN2Q9P270 581 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 F6X3S4 739 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 SLC4A10Q6U841 1118 aa18.7■□□□□ 0.58
CCDC116-201ENST00000292779 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
CCDC116-201ENST00000292779 RTN4Q9NQC3 1192 aaKnown RBP18.69■□□□□ 0.58
CCDC116-201ENST00000292779 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
CCDC116-201ENST00000292779 APBB1O00213 710 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms