RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CSB-PGBD3P0DP91 1061 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 TMEM164Q5U3C3 297 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 CLP1Q92989 425 aaKnown RBP4.03□□□□□ -1.76
HERC4-201ENST00000277817 CASZ1Q86V15 1759 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 TTLL12Q14166 644 aaPredicted RBP4.03□□□□□ -1.76
HERC4-201ENST00000277817 POLR3GLQ9BT43 218 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 SBNO2Q9Y2G9 1366 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 THSD7AQ9UPZ6 1657 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 PEAK1Q9H792 1746 aa4.03□□□□□ -1.76
HERC4-201ENST00000277817 CDHR5Q9HBB8 845 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 SCAF11Q99590 1463 aaKnown RBP4.02□□□□□ -1.77
HERC4-201ENST00000277817 ALS2Q96Q42 1657 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 TLDC2A0PJX2 215 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 MCCD1P59942 119 aaPredicted RBP4.02□□□□□ -1.77
HERC4-201ENST00000277817 EN1Q05925 392 aaPredicted RBP4.02□□□□□ -1.77
HERC4-201ENST00000277817 PRPF38BQ5VTL8 546 aaKnown RBP4.02□□□□□ -1.77
HERC4-201ENST00000277817 PLEKHM2Q8IWE5 1019 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 E9PCH4 1651 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 NAALADL2Q58DX5 795 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 DPH6Q7L8W6 267 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 ADGRG1Q9Y653 693 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 CD46P15529 392 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 WASHC4Q2M389 1173 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 CHADLQ6NUI6 762 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 NFATC2IPQ8NCF5 419 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 EGFL7Q9UHF1 273 aa4.02□□□□□ -1.77
HERC4-201ENST00000277817 MAP3K13O43283 966 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 HDLBPQ00341 1268 aaKnown RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 TAGLNQ01995 201 aaKnown RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 FAM50AQ14320 339 aaKnown RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 RIC3Q7Z5B4 369 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 RBM27Q9P2N5 1060 aaKnown RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 ROBO1Q9Y6N7 1651 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 NEUROD1Q13562 356 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 RTL5Q5HYW3 569 aaPredicted RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 TICAM2Q86XR7 235 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 HMX1Q9NP08 348 aaPredicted RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 POLR3EQ9NVU0 708 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 TFIP11Q9UBB9 837 aaKnown RBP4.01□□□□□ -1.77
HERC4-201ENST00000277817 QPCTQ16769 361 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 PIK3R5Q8WYR1 880 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 GLI3P10071 1580 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 FMN1Q68DA7 1419 aa4.01□□□□□ -1.77
HERC4-201ENST00000277817 NDUFB9Q9Y6M9 179 aa4□□□□□ -1.77
HERC4-201ENST00000277817 SIPA1L2Q9P2F8 1722 aaPredicted RBP4□□□□□ -1.77
HERC4-201ENST00000277817 RGS20O76081 388 aa4□□□□□ -1.77
HERC4-201ENST00000277817 NPR3P17342 541 aa4□□□□□ -1.77
HERC4-201ENST00000277817 MDM2Q00987 491 aaPredicted RBP4□□□□□ -1.77
HERC4-201ENST00000277817 RPUSD2Q8IZ73 545 aaKnown RBP4□□□□□ -1.77
HERC4-201ENST00000277817 ZNF710Q8N1W2 664 aa4□□□□□ -1.77
HERC4-201ENST00000277817 STK32AQ8WU08 396 aa4□□□□□ -1.77
HERC4-201ENST00000277817 MKRN1Q9UHC7 482 aaKnown RBP4□□□□□ -1.77
HERC4-201ENST00000277817 KDM4AO75164 1064 aa4□□□□□ -1.77
HERC4-201ENST00000277817 SF3A1Q15459 793 aaKnown RBP4□□□□□ -1.77
HERC4-201ENST00000277817 TAS1R3Q7RTX0 852 aa4□□□□□ -1.77
HERC4-201ENST00000277817 RGPD1P0DJD0 1748 aa4□□□□□ -1.77
HERC4-201ENST00000277817 ATP9BO43861 1147 aa4□□□□□ -1.77
HERC4-201ENST00000277817 REM2Q8IYK8 340 aaPredicted RBP4□□□□□ -1.77
HERC4-201ENST00000277817 PDCD7Q8N8D1 485 aaKnown RBP4□□□□□ -1.77
HERC4-201ENST00000277817 PPME1Q9Y570 386 aa4□□□□□ -1.77
HERC4-201ENST00000277817 DCCP43146 1447 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 FMN2Q9NZ56 1722 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 SPACA7Q96KW9 195 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 NOS1P29475 1434 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 USP17L8P0C7I0 530 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 PRR29P0C7W0 189 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 ZFYVE9O95405 1425 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 ERBINQ96RT1 1412 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 PHLPP1O60346 1717 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 LAMB1P07942 1786 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 ZNF746Q6NUN9 644 aaPredicted RBP3.99□□□□□ -1.77
HERC4-201ENST00000277817 TBC1D9Q6ZT07 1266 aa3.99□□□□□ -1.77
HERC4-201ENST00000277817 BCCIPQ9P287 314 aaKnown RBP eCLIP3.99□□□□□ -1.77
HERC4-201ENST00000277817 NUTM2FA1L443 756 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 SOX11P35716 441 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 LNPKQ9C0E8 428 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 TRPM2O94759 1503 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 MARCH6O60337 910 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 CACNB1Q02641 598 aaPredicted RBP3.98□□□□□ -1.77
HERC4-201ENST00000277817 OCLNQ16625 522 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 KCNB2Q92953 911 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 ERVK-7P63135 1459 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 FAM196BA6NMK8 535 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 TMEM92Q6UXU6 159 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 MICALL2Q8IY33 904 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 PIF1Q9H611 641 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 QTRT2Q9H974 415 aaKnown RBP3.98□□□□□ -1.77
HERC4-201ENST00000277817 PLEKHG2Q9H7P9 1386 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 PITPNM1O00562 1244 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 ARHGAP4P98171 946 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 DIXDC1Q155Q3 683 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 PLPP6Q8IY26 295 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 PTCD2Q8WV60 388 aaKnown RBP3.98□□□□□ -1.77
HERC4-201ENST00000277817 ZNF592Q92610 1267 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 ASB16Q96NS5 453 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 BCL2L13Q9BXK5 485 aa3.98□□□□□ -1.77
HERC4-201ENST00000277817 ANKRD33BA6NCL7 494 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 PPM1GO15355 546 aaPredicted RBP3.97□□□□□ -1.77
HERC4-201ENST00000277817 TAF7LQ5H9L4 462 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 PHTF2Q8N3S3 785 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms