RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 GPATCH3Q96I76 525 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 ZNF853P0CG23 659 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
PTPN3-201ENST00000262539 OVOS2A0A0J9YW53 1432 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 OVOS2Q6IE36 1432 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 REC8O95072 547 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 GLIPR1L2Q4G1C9 344 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 AKAP4Q5JQC9 854 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
PTPN3-201ENST00000262539 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 BACH2Q9BYV9 841 aa10.16□□□□□ -0.78
PTPN3-201ENST00000262539 TEX13AQ9BXU3 409 aaPredicted RBP10.16□□□□□ -0.78
PTPN3-201ENST00000262539 KDRP35968 1356 aa10.15□□□□□ -0.78
PTPN3-201ENST00000262539 PLEKHF1Q96S99 279 aa10.15□□□□□ -0.78
PTPN3-201ENST00000262539 ADGRB2O60241 1585 aa10.15□□□□□ -0.78
PTPN3-201ENST00000262539 PDIA4P13667 645 aaKnown RBP10.15□□□□□ -0.78
PTPN3-201ENST00000262539 ERC1Q8IUD2 1116 aa10.15□□□□□ -0.78
PTPN3-201ENST00000262539 LRRFIP1Q32MZ4 808 aaKnown RBP10.15□□□□□ -0.78
PTPN3-201ENST00000262539 SMC5Q8IY18 1101 aa10.15□□□□□ -0.78
PTPN3-201ENST00000262539 ALDH1L1O75891 902 aa10.15□□□□□ -0.79
PTPN3-201ENST00000262539 CHMP3Q9Y3E7 222 aa10.15□□□□□ -0.79
PTPN3-201ENST00000262539 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 TAF7LQ5H9L4 462 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 PRDM11Q9NQV5 511 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 GCP02774 474 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 RRS1Q15050 365 aaKnown RBP10.14□□□□□ -0.79
PTPN3-201ENST00000262539 LRRC7Q96NW7 1537 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 VAMP4O75379 141 aa10.14□□□□□ -0.79
PTPN3-201ENST00000262539 HOXC9P31274 260 aa10.13□□□□□ -0.79
PTPN3-201ENST00000262539 PDE4CQ08493 712 aa10.13□□□□□ -0.79
PTPN3-201ENST00000262539 FKBP5Q13451 457 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-201ENST00000262539 HDGFL1Q5TGJ6 251 aa10.13□□□□□ -0.79
PTPN3-201ENST00000262539 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-201ENST00000262539 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
PTPN3-201ENST00000262539 VPS53Q5VIR6 699 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 INTS3Q68E01 1043 aaKnown RBP10.12□□□□□ -0.79
PTPN3-201ENST00000262539 TICAM2Q86XR7 235 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 CEP170BQ9Y4F5 1589 aaPredicted RBP10.12□□□□□ -0.79
PTPN3-201ENST00000262539 BCAR3O75815 825 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 HSP90AB2PQ58FF8 381 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 GNAI2P04899 355 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 MBIPQ9NS73 344 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 PLIN1O60240 522 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 TRIM27P14373 513 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
PTPN3-201ENST00000262539 EYA1Q99502 592 aa10.12□□□□□ -0.79
PTPN3-201ENST00000262539 FOXO3O43524 673 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 KIAA2012Q0VF49 1180 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 SETD1BQ9UPS6 1966 aaKnown RBP10.11□□□□□ -0.79
PTPN3-201ENST00000262539 CLTCQ00610 1675 aaKnown RBP10.11□□□□□ -0.79
PTPN3-201ENST00000262539 GORABQ5T7V8 394 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 PANK1Q8TE04 598 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 TSR2Q969E8 191 aaKnown RBP10.11□□□□□ -0.79
PTPN3-201ENST00000262539 HSCBQ8IWL3 235 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 RUFY2Q8WXA3 655 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 HYPKQ9NX55 129 aa10.11□□□□□ -0.79
PTPN3-201ENST00000262539 UBTFL1P0CB47 393 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-201ENST00000262539 BMP2KLQ5H9B9 411 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-201ENST00000262539 TMEM94Q12767 1356 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 ERC2O15083 957 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 RAB11FIP3O75154 756 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 CDC45O75419 566 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 MCM2P49736 904 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 QRICH2Q9H0J4 1663 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 LTV1Q96GA3 475 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-201ENST00000262539 NOB1Q9ULX3 412 aaKnown RBP10.1□□□□□ -0.79
PTPN3-201ENST00000262539 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
PTPN3-201ENST00000262539 CWC22Q9HCG8 908 aaKnown RBP10.09□□□□□ -0.79
PTPN3-201ENST00000262539 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
PTPN3-201ENST00000262539 MRPL50Q8N5N7 158 aaKnown RBP10.09□□□□□ -0.79
PTPN3-201ENST00000262539 HIP1O00291 1037 aa10.09□□□□□ -0.79
PTPN3-201ENST00000262539 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
PTPN3-201ENST00000262539 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
PTPN3-201ENST00000262539 EVA1CP58658 441 aa10.09□□□□□ -0.79
PTPN3-201ENST00000262539 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
PTPN3-201ENST00000262539 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 BCL2L13Q9BXK5 485 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 ZBTB40Q9NUA8 1239 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 USP19O94966 1318 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 APBB1O00213 710 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 ANKRD44Q8N8A2 993 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 ABCC4O15439 1325 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 IQSEC2Q5JU85 1478 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 LRRC59Q96AG4 307 aaKnown RBP10.08□□□□□ -0.8
PTPN3-201ENST00000262539 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
PTPN3-201ENST00000262539 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
PTPN3-201ENST00000262539 NRDCO43847 1150 aa10.07□□□□□ -0.8
PTPN3-201ENST00000262539 ANKRD24Q8TF21 1146 aa10.07□□□□□ -0.8
PTPN3-201ENST00000262539 NOC3LQ8WTT2 800 aaKnown RBP10.07□□□□□ -0.8
PTPN3-201ENST00000262539 CD163L1Q9NR16 1453 aa10.07□□□□□ -0.8
PTPN3-201ENST00000262539 FLIIQ13045 1269 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms