RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 BICDL1Q6ZP65 573 aa11.56□□□□□ -0.56
CCDC113-201ENST00000219299 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
CCDC113-201ENST00000219299 MBIPQ9NS73 344 aa11.56□□□□□ -0.56
CCDC113-201ENST00000219299 KDM5CP41229 1560 aa11.55□□□□□ -0.56
CCDC113-201ENST00000219299 NEUROD6Q96NK8 337 aa11.55□□□□□ -0.56
CCDC113-201ENST00000219299 PPP1R1BQ9UD71 204 aaPredicted RBP11.55□□□□□ -0.56
CCDC113-201ENST00000219299 AGLP35573 1532 aa11.55□□□□□ -0.56
CCDC113-201ENST00000219299 ARHGEF10O15013 1369 aa11.55□□□□□ -0.56
CCDC113-201ENST00000219299 ANXA1P04083 346 aa11.55□□□□□ -0.56
CCDC113-201ENST00000219299 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
CCDC113-201ENST00000219299 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
CCDC113-201ENST00000219299 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
CCDC113-201ENST00000219299 VPS37DQ86XT2 251 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 CEP152O94986 1710 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 GNAI2P04899 355 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 HSP90AA2PQ14568 343 aaPredicted RBP11.54□□□□□ -0.56
CCDC113-201ENST00000219299 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 ISY1Q9ULR0 285 aaKnown RBP11.54□□□□□ -0.56
CCDC113-201ENST00000219299 F6X3S4 739 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 IL13P35225 146 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
CCDC113-201ENST00000219299 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 SBNO1A3KN83 1393 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 ARHGEF40Q8TER5 1519 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 FAM135BQ49AJ0 1406 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
CCDC113-201ENST00000219299 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
CCDC113-201ENST00000219299 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
CCDC113-201ENST00000219299 LMTK2Q8IWU2 1503 aa11.52□□□□□ -0.56
CCDC113-201ENST00000219299 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.56
CCDC113-201ENST00000219299 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
CCDC113-201ENST00000219299 PTPRMP28827 1452 aa11.52□□□□□ -0.57
CCDC113-201ENST00000219299 MVPQ14764 893 aaKnown RBP11.51□□□□□ -0.57
CCDC113-201ENST00000219299 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
CCDC113-201ENST00000219299 BRINP3Q76B58 766 aa11.51□□□□□ -0.57
CCDC113-201ENST00000219299 E9PCH4 1651 aa11.51□□□□□ -0.57
CCDC113-201ENST00000219299 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
CCDC113-201ENST00000219299 CLASRPQ8N2M8 674 aaKnown RBP11.51□□□□□ -0.57
CCDC113-201ENST00000219299 ZBTB3Q9H5J0 574 aa11.51□□□□□ -0.57
CCDC113-201ENST00000219299 SIL1Q9H173 461 aa11.51□□□□□ -0.57
CCDC113-201ENST00000219299 AAMPQ13685 434 aa11.51□□□□□ -0.57
CCDC113-201ENST00000219299 SLKQ9H2G2 1235 aaPredicted RBP11.51□□□□□ -0.57
CCDC113-201ENST00000219299 PPRC1Q5VV67 1664 aaKnown RBP11.5□□□□□ -0.57
CCDC113-201ENST00000219299 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
CCDC113-201ENST00000219299 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
CCDC113-201ENST00000219299 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
CCDC113-201ENST00000219299 SPHKAPQ2M3C7 1700 aa11.5□□□□□ -0.57
CCDC113-201ENST00000219299 TOMM22Q9NS69 142 aa11.5□□□□□ -0.57
CCDC113-201ENST00000219299 FLIIQ13045 1269 aa11.5□□□□□ -0.57
CCDC113-201ENST00000219299 KRT24Q2M2I5 525 aa11.5□□□□□ -0.57
CCDC113-201ENST00000219299 LARP1Q6PKG0 1096 aaKnown RBP11.5□□□□□ -0.57
CCDC113-201ENST00000219299 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 C20orf194Q5TEA3 1177 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 USP21Q9UK80 565 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 ZPR1O75312 459 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 ALDH1L2Q3SY69 923 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 FBXW7Q969H0 707 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 ADGRB3O60242 1522 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 GOLGA6L4A6NEF3 574 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
CCDC113-201ENST00000219299 GSE1Q14687 1217 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 MYD88Q99836 296 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
CCDC113-201ENST00000219299 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 IL16Q14005 1332 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 KDM4FA0A1W2PPD8 638 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 GPTP24298 496 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 CAMSAP1Q5T5Y3 1602 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 NKTRP30414 1462 aaKnown RBP11.48□□□□□ -0.57
CCDC113-201ENST00000219299 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
CCDC113-201ENST00000219299 HYPKQ9NX55 129 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 PI4KAP2A4QPH2 592 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 PI4KAP1Q8N8J0 262 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 DNAAF4Q8WXU2 420 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 TEX13AQ9BXU3 409 aaPredicted RBP11.48□□□□□ -0.57
CCDC113-201ENST00000219299 ALKQ9UM73 1620 aa11.48□□□□□ -0.57
CCDC113-201ENST00000219299 HTATSF1O43719 755 aaKnown RBP11.47□□□□□ -0.57
CCDC113-201ENST00000219299 ARHGEF25Q86VW2 580 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 USP6P35125 1406 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 ATP5J2-PTCD1G3V325 749 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 CCDC27Q2M243 656 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 TRIM27P14373 513 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 SYNMO15061 1565 aa11.47□□□□□ -0.57
CCDC113-201ENST00000219299 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
CCDC113-201ENST00000219299 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
CCDC113-201ENST00000219299 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.57
CCDC113-201ENST00000219299 TSPYL6Q8N831 410 aa11.46□□□□□ -0.57
CCDC113-201ENST00000219299 MAP3K5Q99683 1374 aa11.46□□□□□ -0.57
CCDC113-201ENST00000219299 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms