RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RETREG3Q86VR2 466 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 SPATA24Q86W54 205 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 TMEM126BQ8IUX1 230 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 LILRA2Q8N149 483 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 MIER2Q8N344 545 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 LRGUKQ96M69 825 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 PCDHAC1Q9H158 963 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 COPS7BQ9H9Q2 264 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-211ENST00000641213 TMEM39AQ9NV64 488 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 CD274Q9NZQ7 290 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 TMEM181Q9P2C4 612 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 ZNF225Q9UK10 706 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 MAFFQ9ULX9 164 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 TMCO1Q9UM00 188 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 ATP11BQ9Y2G3 1177 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 DTNAQ9Y4J8 743 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 TIMM22Q9Y584 194 aa16.91■□□□□ 0.3
PHGDH-211ENST00000641213 PRORSD1PA6NEY8 169 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 RNASEH1O60930 286 aaKnown RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 VPS4BO75351 444 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 BMP1P13497 986 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 HGFP14210 728 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 CMTR2Q8IYT2 770 aaKnown RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 ESAMQ96AP7 390 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 ROPN1LQ96C74 230 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 CCDC97Q96F63 343 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 HGH1Q9BTY7 390 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 PLK2Q9NYY3 685 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 EPS15L1Q9UBC2 864 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 CLEC4EQ9ULY5 219 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 ASB1Q9Y576 335 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 PLXNB3Q9ULL4 1909 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 CAPN8A6NHC0 703 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 BBIP1A8MTZ0 92 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 NR5A2O00482 541 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 GAPDHSO14556 408 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 PRMT5O14744 637 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 SNX2O60749 519 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 LILRB3O75022 631 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 ESRRBO95718 433 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 MLYCDO95822 493 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 FAM151BQ6UXP7 276 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 HTR3DQ70Z44 454 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 ICA1LQ8NDH6 482 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 PLEKHG4BQ96PX9 1271 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 NUSAP1Q9BXS6 441 aaKnown RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 SDR39U1Q9NRG7 319 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-211ENST00000641213 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 CFAP97Q9P2B7 532 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 DHRS7Q9Y394 339 aa16.9■□□□□ 0.3
PHGDH-211ENST00000641213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 E2F3O00716 465 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 MATN4O95460 622 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 CKMP06732 381 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 UROSP10746 265 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 VCLP18206 1134 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 GKP32189 559 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 CA5AP35218 305 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 RFC2P35250 354 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 BCL2L1Q07817 233 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 TRAP1Q12931 704 aaKnown RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 MED21Q13503 144 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 TGFBIQ15582 683 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 RBBP7Q16576 425 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 SAMD4BQ5PRF9 694 aaKnown RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 RARS2Q5T160 578 aaKnown RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 BBS7Q8IWZ6 715 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 HS6ST3Q8IZP7 471 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PCYOX1LQ8NBM8 494 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 OR56A4Q8NGH8 313 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■■■■ 60.5
PHGDH-211ENST00000641213 ACDQ96AP0 544 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 DCUN1D1Q96GG9 259 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PDLIM5Q96HC4 596 aaKnown RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 BTBD9Q96Q07 612 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 TUBGCP5Q96RT8 1024 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PKP2Q99959 881 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 SLC39A3Q9BRY0 314 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 ZFYVE1Q9HBF4 777 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 MAP10Q9P2G4 905 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 EIF2B4Q9UI10 523 aaKnown RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PCDHB1Q9Y5F3 818 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 HTRA2O43464 458 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PRAMEF1O95521 474 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 TRBC1P01850 177 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 C8BP07358 591 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PRR35P0CG20 571 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 IDO1P14902 403 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 CAPN3P20807 821 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 PAX7P23759 505 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 RPL26P61254 145 aaKnown RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 LMAN2Q12907 356 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 VPS26BQ4G0F5 336 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 OGFOD2Q6N063 350 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 SERPINA9Q86WD7 417 aa16.89■□□□□ 0.29
PHGDH-211ENST00000641213 APLFQ8IW19 511 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-211ENST00000641213 CPXM2Q8N436 756 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms