RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 LDLRAP1Q5SW96 308 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 N4BP2L1Q5TBK1 243 aaPredicted RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 TTC19Q6DKK2 380 aaPredicted RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 PTRHD1Q6GMV3 140 aaKnown RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 NEK5Q6P3R8 708 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 MACC1Q6ZN28 852 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 CDHR3Q6ZTQ4 885 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 SYT13Q7L8C5 426 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 TBC1D1Q86TI0 1168 aaPredicted RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 PLD6Q8N2A8 252 aaKnown RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 BTN2A2Q8WVV5 523 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 CKAP2Q8WWK9 683 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 MRGPRX1Q96LB2 322 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 UBXN10Q96LJ8 280 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 FAM111AQ96PZ2 611 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 SLC6A17Q9H1V8 727 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 C12orf65Q9H3J6 166 aaKnown RBP11.66□□□□□ -0.54
CLN6-223ENST00000637823 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 SYTL2Q9HCH5 934 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 GPAMQ9HCL2 828 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 PREBQ9HCU5 417 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 LTB4R2Q9NPC1 389 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 SERGEFQ9UGK8 458 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 COQ6Q9Y2Z9 468 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 ANKRD12Q6UB98 2062 aa11.66□□□□□ -0.54
CLN6-223ENST00000637823 TCRBV21S2A2A0A5A6 115 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 FAM170BA6NMN3 283 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 CFAP99D6REC4 459 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 E5RI56 91 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 F8W8V4 182 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 BIRC5O15392 142 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 PLIN3O60664 434 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 AP2A2O94973 939 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 PROCP04070 461 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 LTA4HP09960 611 aaKnown RBP11.65□□□□□ -0.54
CLN6-223ENST00000637823 CCDC166P0CW27 439 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 RALBP11234 206 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 NDUFV2P19404 249 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 CHRM3P20309 590 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 LSP1P33241 339 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 IRF9Q00978 393 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 FZD5Q13467 585 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 ZNF460Q14592 562 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 UBXN2BQ14CS0 331 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 FAM83EQ2M2I3 478 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 GPRC6AQ5T6X5 926 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 AGAP9Q5VTM2 703 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 KIAA1161Q6NSJ0 714 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 KIAA1324Q6UXG2 1013 aaKnown RBP11.65□□□□□ -0.54
CLN6-223ENST00000637823 TAX1BP1Q86VP1 789 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 CACUL1Q86Y37 369 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 CENPLQ8N0S6 344 aaPredicted RBP11.65□□□□□ -0.54
CLN6-223ENST00000637823 SIX5Q8N196 739 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 DDHD1Q8NEL9 900 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 OR14C36Q8NHC7 312 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 GDAP1Q8TB36 358 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 KCNJ9Q92806 393 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 GLYATL1Q969I3 302 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 NXNL1Q96CM4 212 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 DCUN1D1Q96GG9 259 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 MAGEB18Q96M61 343 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 GPR78Q96P69 363 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 BOCQ9BWV1 1114 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 C1QTNF2Q9BXJ5 285 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 CCDC134Q9H6E4 229 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 NMRAL1Q9HBL8 299 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 MLXIPLQ9NP71 852 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 ITM2CQ9NQX7 267 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 TMEM216Q9P0N5 145 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 EMCNQ9ULC0 261 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 DHRS7Q9Y394 339 aa11.65□□□□□ -0.54
CLN6-223ENST00000637823 MTF2Q9Y483 593 aaPredicted RBP11.65□□□□□ -0.54
CLN6-223ENST00000637823 OAS3Q9Y6K5 1087 aaKnown RBP11.65□□□□□ -0.54
CLN6-223ENST00000637823 FADS2P1A8MWK0 482 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 RNGTTO60942 597 aaKnown RBP11.64□□□□□ -0.55
CLN6-223ENST00000637823 NIPSNAP2O75323 286 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 SLC25A14O95258 325 aaPredicted RBP11.64□□□□□ -0.55
CLN6-223ENST00000637823 TOP3BO95985 862 aaKnown RBP11.64□□□□□ -0.55
CLN6-223ENST00000637823 OR56A5P0C7T3 313 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 ATP1B2P14415 290 aaPredicted RBP11.64□□□□□ -0.55
CLN6-223ENST00000637823 GABRG2P18507 467 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 MSH3P20585 1137 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 GMPRP36959 345 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 GPR1P46091 355 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 SERPINB4P48594 390 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 PGGT1BP53609 377 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 B4GALNT1Q00973 533 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 GABPB1Q06547 395 aaPredicted RBP11.64□□□□□ -0.55
CLN6-223ENST00000637823 DLG1Q12959 904 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 SGCGQ13326 291 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 ACAP2Q15057 778 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 PDK4Q16654 411 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 C16orf46Q6P387 395 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 KLC3Q6P597 504 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 TMEM207Q6UWW9 146 aa11.64□□□□□ -0.55
CLN6-223ENST00000637823 Q6ZS52 159 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms