RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TBL1XR1Q9BZK7 514 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ING2Q9H160 280 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 CCDC86Q9H6F5 360 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 NOL6Q9H6R4 1146 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 GDAP2Q9NXN4 497 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 A0A1B0GVT2 93 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 B4GALT2O60909 372 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 TSHRP16473 764 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 DRG2P55039 364 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 C12orf56Q8IXR9 622 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 OR5M3Q8NGP4 307 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 FAM174AQ8TBP5 190 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ADAMTS15Q8TE58 950 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 USP6NLQ92738 828 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MMABQ96EY8 250 aaPredicted RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 AFDNP55196 1824 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MBTPS2O43462 519 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 PI15O43692 258 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 NR2F1P10589 423 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 INHBCP55103 352 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 LSM12Q3MHD2 195 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 VWA2Q5GFL6 755 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 OR10H5Q8NGA6 315 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ELSPBP1Q96BH3 223 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 NXPE2Q96DL1 559 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MID1IP1Q9NPA3 183 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 TM7SF3Q9NS93 570 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 PPEF2O14830 753 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ABCB7O75027 752 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 FAM228BP0C875 321 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 NSG1P42857 185 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 C1orf189Q5VU69 101 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 FAM92BQ6ZTR7 304 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MRPL10Q7Z7H8 261 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 GBP7Q8N8V2 638 aaPredicted RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 CPT1BQ92523 772 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ERP27Q96DN0 273 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 EQTNQ9NQ60 294 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 NENFQ9UMX5 172 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MAN1A2O60476 641 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ECI2O75521 394 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 FESP07332 822 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MAMLD1Q13495 774 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.687e-8■□□□□ 9.8
POLR2A-209ENST00000617998 NIPAL1Q6NVV3 410 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 CEACAM20Q6UY09 585 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 FNDC5Q8NAU1 212 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 KCT2Q8NC54 265 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MLXIPLQ9NP71 852 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 WNT16Q9UBV4 365 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 PLAAQ9Y263 795 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 STRCQ7RTU9 1775 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 LINC01565O15544 149 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 RRP9O43818 475 aaKnown RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 CCNCP24863 283 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 RPL4P36578 427 aaKnown RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 FUT11Q495W5 492 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 NPNTQ6UXI9 565 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 STYXQ8WUJ0 223 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 ZBP1Q9H171 429 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 DUSP12Q9UNI6 340 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 MKRN2OSH3BPM6 223 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 TM9SF1O15321 606 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 LRPAP1P30533 357 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 ZNF132P52740 706 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 ARFIP2P53365 341 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 TBX2Q13207 712 aaPredicted RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 CCDC81Q6ZN84 652 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 RDH11Q8TC12 318 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 MIEF2Q96C03 454 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 DACH2Q96NX9 599 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 KLF6Q99612 283 aaPredicted RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 CCT7Q99832 543 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 PTGES2Q9H7Z7 377 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 SPATS2LQ9NUQ6 558 aaKnown RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 MCM8Q9UJA3 840 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 DDX3YO15523 660 aaKnown RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 P04436 131 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 ZNF621Q6ZSS3 439 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 HEATR4Q86WZ0 1026 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 LNX1Q8TBB1 728 aaPredicted RBP10.82□□□□□ -0.68
POLR2A-209ENST00000617998 PROX1Q92786 737 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 RADILQ96JH8 1075 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 FAM111AQ96PZ2 611 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 LTB4R2Q9NPC1 389 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 A0A087X1B8 175 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 CIB4A0PJX0 185 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 OR6C74A6NCV1 312 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 CNTFP26441 200 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 ZNF252P-AS1Q0IIN9 211 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 INPP5AQ14642 412 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 SLC9A4Q6AI14 798 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 SH3GL1Q99961 368 aa10.82□□□□□ -0.68
POLR2A-209ENST00000617998 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms