RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 TBC1D1Q86TI0 1168 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 TMEM151AQ8N4L1 468 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 GIMAP7Q8NHV1 300 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 KCNJ9Q92806 393 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 NUS1Q96E22 293 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 MRGPRX1Q96LB2 322 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 COPS8Q99627 209 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 NMRAL1Q9HBL8 299 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 POPDC3Q9HBV1 291 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 MBD1Q9UIS9 605 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 RUVBL2Q9Y230 463 aaKnown RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 OAS3Q9Y6K5 1087 aaKnown RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 KRBA1A5PL33 1030 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 TK2O00142 265 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 LZTS3O60299 673 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 PDAP1Q13442 181 aaKnown RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 ITIH4Q14624 930 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 HSF5Q4G112 596 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-212ENST00000598896 LCA5Q86VQ0 697 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 LKAAEAR1Q8TD35 194 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 HEXDCQ8WVB3 486 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 COMMD10Q9Y6G5 202 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 K7ESM1 405 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 TSPAN6O43657 245 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 MTX2O75431 263 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 SBK3P0C264 359 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 C7P10643 843 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 TAC1P20366 129 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 CCDC153Q494R4 210 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 KHDC1Q4VXA5 237 aaKnown RBP23.1■■□□□ 1.29
SYMPK-212ENST00000598896 PAQR3Q6TCH7 311 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 FSTL5Q8N475 847 aaPredicted RBP23.1■■□□□ 1.29
SYMPK-212ENST00000598896 CCDC63Q8NA47 563 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 SIDT2Q8NBJ9 832 aaKnown RBP23.1■■□□□ 1.29
SYMPK-212ENST00000598896 EPN3Q9H201 632 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 PIKFYVEQ9Y2I7 2098 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 VCANP13611 3396 aa23.1■■□□□ 1.29
SYMPK-212ENST00000598896 TCP11X1B4DZS4 312 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 VPS26AO75436 327 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 NDUFV2P19404 249 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CD9P21926 228 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 TARSP26639 723 aaKnown RBP23.09■■□□□ 1.29
SYMPK-212ENST00000598896 NSG1P42857 185 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 PCLAFQ15004 111 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CRY1Q16526 586 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 PTRHD1Q6GMV3 140 aaKnown RBP23.09■■□□□ 1.29
SYMPK-212ENST00000598896 LRRC8EQ6NSJ5 796 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CD200R1Q8TD46 325 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 GANCQ8TET4 914 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 SIPA1Q96FS4 1042 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CD93Q9NPY3 652 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CPSF2Q9P2I0 782 aaKnown RBP23.09■■□□□ 1.29
SYMPK-212ENST00000598896 GNPTGQ9UJJ9 305 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 NUMA1Q14980 2115 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 GMNCA6NCL1 334 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 IGLON5A6NGN9 336 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 PCDH8O95206 1070 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 BPGMP07738 259 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 LTA4HP09960 611 aaKnown RBP23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CHRM3P20309 590 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CLCN7P51798 805 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 PRKCQQ04759 706 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 SEL1L3Q68CR1 1132 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 MACC1Q6ZN28 852 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF765Q7L2R6 523 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 CCDC91Q7Z6B0 441 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 DDHD1Q8NEL9 900 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 BTN2A2Q8WVV5 523 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 TSNARE1Q96NA8 513 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 VPS35Q96QK1 796 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 COPG2Q9UBF2 871 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 XPR1Q9UBH6 696 aa23.09■■□□□ 1.29
SYMPK-212ENST00000598896 TRPM6Q9BX84 2022 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 E5RI56 91 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 PLRG1O43660 514 aaKnown RBP23.08■■□□□ 1.29
SYMPK-212ENST00000598896 SLC26A3P40879 764 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 TSNAXIP1Q2TAA8 658 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF648Q5T619 568 aaPredicted RBP23.08■■□□□ 1.29
SYMPK-212ENST00000598896 FLCNQ8NFG4 579 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 GLYATL1Q969I3 302 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 CHMP6Q96FZ7 201 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 SIRPGQ9P1W8 387 aa23.08■■□□□ 1.29
SYMPK-212ENST00000598896 DOCK9Q9BZ29 2069 aa23.08■■□□□ 1.28
SYMPK-212ENST00000598896 TCRBV21S2A2A0A5A6 115 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 C19orf67A6NJJ6 358 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 SRRM3A6NNA2 597 aaPredicted RBP23.07■■□□□ 1.28
SYMPK-212ENST00000598896 TARM1B6A8C7 271 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 G3V2L1 256 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 PYGLP06737 847 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 ITGB6P18564 788 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 BGNP21810 368 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 KCNA4P22459 653 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 AKT1P31749 480 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 ADPRHP54922 357 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 DPTQ07507 201 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 FAM83EQ2M2I3 478 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 RGS9BPQ6ZS82 235 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 LRRC34Q8IZ02 419 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 OR14C36Q8NHC7 312 aa23.07■■□□□ 1.28
SYMPK-212ENST00000598896 ZNF75CPQ92670 426 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms