RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 GPR39O43194 453 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 LDB2O43679 373 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CSO75390 466 aaKnown RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 TCEA3O75764 348 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CDK14O94921 469 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ACP5P13686 325 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ETS1P14921 441 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 TPH1P17752 444 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 FDFT1P37268 417 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CCL7P80098 99 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CYP4F3Q08477 520 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 TMEM115Q12893 351 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ITGA9Q13797 1035 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 SPIDRQ14159 915 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 RBM44Q6ZP01 1051 aaKnown RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 PRUNE1Q86TP1 453 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 LINC00523Q86TU6 105 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CCNJLQ8IV13 435 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 NAGSQ8N159 534 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ARL14Q8N4G2 192 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 Q8N9G6 341 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 GLIS1Q8NBF1 620 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 OR13C4Q8NGS5 318 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 MDM1Q8TC05 714 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF398Q8TD17 642 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ZCCHC14Q8WYQ9 949 aaKnown RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 TTC25Q96NG3 672 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 C19orf43Q9BQ61 176 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 CCDC86Q9H6F5 360 aaKnown RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ETNK1Q9HBU6 452 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 PAK5Q9P286 719 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 TBC1D29Q9UFV1 150 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 SLC23A2Q9UGH3 650 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 ZMIZ1Q9ULJ6 1067 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 KCNK6Q9Y257 313 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 DRG1Q9Y295 367 aaKnown RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 PCDHB1Q9Y5F3 818 aa9.08□□□□□ -0.96
DNMT1-223ENST00000591239 KMT2BQ9UMN6 2715 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-223ENST00000591239 TRBV23OR9-2A0A075B6M9 112 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ERI2A8K979 691 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 RHPN2P1A8MT19 583 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 E7EVH7 732 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 KMOO15229 486 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 KIF5CO60282 957 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SNX2O60749 519 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SRP72O76094 671 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 PRAMEF1O95521 474 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 EML2O95834 649 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 RPLP0P05388 317 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ZSCAN5DPP0CG00 497 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ALDH4A1P30038 563 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 CA5AP35218 305 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 RPL22P35268 128 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 HADHAP40939 763 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 KCNJ1P48048 391 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 LMAN1P49257 510 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF140P52738 457 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 TMPRSS15P98073 1019 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 XIAPP98170 497 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 NFATC2Q13469 925 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 BIRC2Q13490 618 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 POU6F1Q14863 301 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 RTP5Q14D33 572 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 INSCQ1MX18 579 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ISXQ2M1V0 245 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 LDLRAP1Q5SW96 308 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 GPRC6AQ5T6X5 926 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 IYDQ6PHW0 289 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 CRTC3Q6UUV7 619 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 GSTA5Q7RTV2 222 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF438Q7Z4V0 828 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SPRED1Q7Z699 444 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 LRRTM4Q86VH4 590 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 TRAPPC5Q8IUR0 188 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF547Q8IVP9 402 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SLC35F6Q8N357 371 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 RASGEF1CQ8N431 466 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 PRELID2Q8N945 189 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 DNAAF3Q8N9W5 541 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 DDHD1Q8NEL9 900 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SLC37A2Q8TED4 501 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 NXPE2Q96DL1 559 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 MS4A14Q96JA4 679 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 PBKQ96KB5 322 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 GFM1Q96RP9 751 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ZCCHC2Q9C0B9 1178 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 NRSN2Q9GZP1 204 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 LRRN3Q9H3W5 708 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 OSGEPL1Q9H4B0 414 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ASB8Q9H765 288 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SYNDIG1Q9H7V2 258 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 HOMER3Q9NSC5 361 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 KLC4Q9NSK0 619 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 SMOXQ9NWM0 555 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 PIH1D1Q9NWS0 290 aaKnown RBP9.07□□□□□ -0.96
DNMT1-223ENST00000591239 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 FKBPLQ9UIM3 349 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 AK5Q9Y6K8 562 aa9.07□□□□□ -0.96
DNMT1-223ENST00000591239 ZFC3H1O60293 1989 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms