RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 B4GALT3O60512 393 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 SNX2O60749 519 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 RNASEH1O60930 286 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 SUPT3HO75486 399 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 RHOCP08134 193 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CD9P21926 228 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 SLC7A1P30825 629 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PPP3CCP48454 512 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ALDH7A1P49419 539 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 IL2P60568 153 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 MS4A2Q01362 244 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PABPC1LQ4VXU2 614 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 LIN52Q52LA3 116 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 COQ5Q5HYK3 327 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CLEC6AQ6EIG7 209 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 KIAA1841Q6NSI8 718 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TMEM207Q6UWW9 146 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CHST9Q7L1S5 443 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CIR1Q86X95 450 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 DHFR2Q86XF0 187 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CFAP52Q8N1V2 620 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 STK40Q8N2I9 435 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TTC9BQ8N6N2 239 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PCDH20Q8N6Y1 951 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 EXT2Q93063 718 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PPWD1Q96BP3 646 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TUBGCP3Q96CW5 907 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CYP2S1Q96SQ9 504 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 AKTIPQ9H8T0 292 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 NMRK2Q9NPI5 230 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TRPM5Q9NZQ8 1165 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TRMT6Q9UJA5 497 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 AGO1Q9UL18 857 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 KCTD3Q9Y597 815 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ZFP37Q9Y6Q3 630 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 NYNRINQ9P2P1 1898 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 A0A0J9YYE9 177 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PRSS51A0A1B0GVH4 220 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ATP6AP2A0A1C7CYW4 349 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 KANSL1LA0AUZ9 987 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TTC24A2A3L6 582 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 E5RI56 91 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 E7ENX8 843 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 STX16-NPEPL1H3BU86 382 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ARVCFO00192 962 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CCL22O00626 93 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 STX16O14662 325 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 STX7O15400 261 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CLASP2O75122 1294 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ATP6AP2O75787 350 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CLPTM1O96005 669 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 C8BP07358 591 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 FMO4P31512 558 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 MSX2P35548 267 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 POLE2P56282 527 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ROR2Q01974 943 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CLCQ05315 142 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 BNIP2Q12982 314 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CAMK2GQ13555 558 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 INPP5AQ14642 412 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 MBTPS1Q14703 1052 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 USP41Q3LFD5 358 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ADGRF1Q5T601 910 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 IRAK1BP1Q5VVH5 260 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 NADSYN1Q6IA69 706 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ZNF783Q6ZMS7 281 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PIM3Q86V86 326 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 HERC6Q8IVU3 1022 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 GALNT15Q8N3T1 639 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 OR4K2Q8NGD2 314 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 OR13C4Q8NGS5 318 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 SHKBP1Q8TBC3 707 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 DDI1Q8WTU0 396 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 ZFAND2BQ8WV99 257 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TWIST2Q8WVJ9 160 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 LINC01599Q8WXQ3 324 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PTERQ96BW5 349 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 CASD1Q96PB1 797 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 NUSAP1Q9BXS6 441 aaKnown RBP7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TRIM4Q9C037 500 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 MUC13Q9H3R2 512 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 RIC8BQ9NVN3 520 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TMEM45AQ9NWC5 275 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PLK2Q9NYY3 685 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 TMEM181Q9P2C4 612 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 THEGQ9P2T0 379 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 HSFX1Q9UBD0 423 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 SRRDQ9UH36 339 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 RIMS3Q9UJD0 308 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PACSIN3Q9UKS6 424 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 PKP3Q9Y446 797 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 DNAJC15Q9Y5T4 150 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 MYO16Q9Y6X6 1858 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 A0A0D9SEW6 157 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 A0A1W2PNR3 127 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 A0A1W2PQ45 241 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 A0A1W2PQY0 241 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DYTNA2CJ06 578 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ENO4A6NNW6 628 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms