RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 DNAJC6O75061 913 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 RALBP11234 206 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 CKMT1AP12532 417 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 SPINK2P20155 84 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 ADRA1DP25100 572 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 MGAT1P26572 445 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 PRAMEP78395 509 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 TMEM115Q12893 351 aaPredicted RBP12.66□□□□□ -0.38
CDT1-203ENST00000569140 NFATC2Q13469 925 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 PEX6Q13608 980 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 LRP8Q14114 963 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 KHDC1Q4VXA5 237 aaKnown RBP12.66□□□□□ -0.38
CDT1-203ENST00000569140 TSTD2Q5T7W7 516 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 CASC4Q6P4E1 433 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 SNX20Q7Z614 316 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 LRRTM4Q86VH4 590 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 OTUD6BQ8N6M0 293 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 FAM181AQ8N9Y4 354 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 DDHD1Q8NEL9 900 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 GPBAR1Q8TDU6 330 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDT1-203ENST00000569140 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 ABCG4Q9H172 646 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 SYBUQ9NX95 663 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 SLC2A6Q9UGQ3 507 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 PADI4Q9UM07 663 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 TCAF1Q9Y4C2 921 aa12.66□□□□□ -0.38
CDT1-203ENST00000569140 PCYT1BQ9Y5K3 369 aaPredicted RBP12.66□□□□□ -0.38
CDT1-203ENST00000569140 CEP250Q9BV73 2442 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 TRBV23OR9-2A0A075B6M9 112 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 MROH6A6NGR9 719 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 OR51F1A6NGY5 319 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 CFAP99D6REC4 459 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 CCDC188H7C350 402 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 KMOO15229 486 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 TMEM63AO94886 807 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 TRIM16O95361 564 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 TOP3BO95985 862 aaKnown RBP12.65□□□□□ -0.38
CDT1-203ENST00000569140 ACP1P24666 158 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 CA5AP35218 305 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 ARSDP51689 593 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 MAZP56270 477 aaKnown RBP12.65□□□□□ -0.38
CDT1-203ENST00000569140 CLDN6P56747 220 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 XIAPP98170 497 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 CDK16Q00536 496 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 CACNG1Q06432 222 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 C2orf54Q08AI8 447 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 PTK6Q13882 451 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 SMAD1Q15797 465 aaKnown RBP12.65□□□□□ -0.38
CDT1-203ENST00000569140 SEPT7Q16181 437 aaKnown RBP12.65□□□□□ -0.38
CDT1-203ENST00000569140 PCID2Q5JVF3 399 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 FNBP1LQ5T0N5 605 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 AFTPHQ6ULP2 937 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 NRROSQ86YC3 692 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 SFTPA2Q8IWL1 248 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 OR6P1Q8NGX9 317 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 MAPK15Q8TD08 544 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 NAT14Q8WUY8 206 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 CPT1BQ92523 772 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 SCARF2Q96GP6 870 aaPredicted RBP12.65□□□□□ -0.38
CDT1-203ENST00000569140 CDKN2AIPNLQ96HQ2 116 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 RANBP9Q96S59 729 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 KRT12Q99456 494 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 TRIM51Q9BSJ1 452 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 TRIM31Q9BZY9 425 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 KLC4Q9NSK0 619 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
CDT1-203ENST00000569140 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 SAMD15Q9P1V8 674 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 FAM8A1Q9UBU6 413 aa12.65□□□□□ -0.38
CDT1-203ENST00000569140 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 LY6G6EA0A0G2JKS1 128 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 CCDC162PA2VCL2 907 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 RHPN2P1A8MT19 583 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 PDZK1P1A8MUH7 402 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 GPR89AB7ZAQ6 455 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 TTI1O43156 1089 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 AVILO75366 819 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 URI1O94763 535 aaPredicted RBP12.64□□□□□ -0.39
CDT1-203ENST00000569140 GOT2P00505 430 aaKnown RBP12.64□□□□□ -0.39
CDT1-203ENST00000569140 GPR89BP0CG08 455 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 PRSS56P0CW18 603 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 ZNF7P17097 686 aaPredicted RBP12.64□□□□□ -0.39
CDT1-203ENST00000569140 VCLP18206 1134 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 NPY2RP49146 381 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 CDKN1CP49918 316 aaPredicted RBP12.64□□□□□ -0.39
CDT1-203ENST00000569140 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 IZUMO3Q5VZ72 239 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 TMEM220Q6QAJ8 160 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 NLRP9Q7RTR0 991 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 SERPINA9Q86WD7 417 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 JAMLQ86YT9 394 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms