RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SPRP35270 261 aaPredicted RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 NUDT1P36639 197 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 GPR1P46091 355 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 CD151P48509 253 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 MPP1Q00013 466 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 ITIH4Q14624 930 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 ZSCAN26Q16670 478 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 KRT71Q3SY84 523 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 LGSNQ5TDP6 509 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 RAET1GQ6H3X3 334 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 PNCKQ6P2M8 343 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 SLC36A4Q6YBV0 504 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 LDB1Q86U70 411 aaPredicted RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 SERPINA9Q86WD7 417 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 NXPE1Q8N323 547 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 SUMF1Q8NBK3 374 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 DENND6BQ8NEG7 585 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 EPS8L3Q8TE67 593 aaKnown RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 BTN2A2Q8WVV5 523 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 CENPTQ96BT3 561 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 SPACA7Q96KW9 195 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 RBBP8Q99708 897 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 C6orf106Q9H6K1 298 aaPredicted RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 FBXO6Q9NRD1 293 aaPredicted RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 ZDHHC3Q9NYG2 299 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 EURLQ9NYK6 297 aa12.8□□□□□ -0.36
SPG7-209ENST00000564047 PSMC3IPQ9P2W1 217 aaPredicted RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 CORO1CQ9ULV4 474 aaPredicted RBP12.8□□□□□ -0.36
SPG7-209ENST00000564047 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 ERICH4A6NGS2 130 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 GPR39O43194 453 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 NDUFS2O75306 463 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 FAM155BO75949 473 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 HAUS5O94927 633 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 SOD1P00441 154 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 IGHV4-34P06331 123 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 MYZAPP0CAP1 466 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 ZNF7P17097 686 aaPredicted RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 MAT2AP31153 395 aaKnown RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 CA5AP35218 305 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 PTGER3P43115 390 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 SLCO1A2P46721 670 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 LIMK2P53671 638 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 ADARP55265 1226 aaKnown RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 DMWDQ09019 674 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 IRF4Q15306 451 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 DBN1Q16643 649 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 TAOK1Q7L7X3 1001 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 WDR5BQ86VZ2 330 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 LONP2Q86WA8 852 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 ZC3HC1Q86WB0 502 aaKnown RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 MAML2Q8IZL2 1156 aaPredicted RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 RBFAQ8N0V3 343 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 DDHD1Q8NEL9 900 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 CADM4Q8NFZ8 388 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 HEXDCQ8WVB3 486 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 LPGAT1Q92604 370 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 KLK6Q92876 244 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 GLYATL1Q969I3 302 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 COPS8Q99627 209 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 CAPS2Q9BXY5 557 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 RHOJQ9H4E5 214 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 MBNL1Q9NR56 388 aaKnown RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 FBXO4Q9UKT5 387 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 TMPRSS11EQ9UL52 423 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 DMTF1Q9Y222 760 aa12.79□□□□□ -0.36
SPG7-209ENST00000564047 ANKRD11Q6UB99 2663 aaPredicted RBP12.79□□□□□ -0.36
SPG7-209ENST00000564047 SCN8AQ9UQD0 1980 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 IQANK1A0A1B0GTG1 560 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 SMIM23A6NLE4 172 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 K7ESM1 405 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 SLC31A1O15431 190 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 KRT38O76015 456 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 FSBPO95073 299 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 PCCBP05166 539 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 ADRB1P08588 477 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
SPG7-209ENST00000564047 RPS3P23396 243 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPG7-209ENST00000564047 TRIM23P36406 574 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
SPG7-209ENST00000564047 ZNF789Q5FWF6 425 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 LDLRAP1Q5SW96 308 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 GPRC6AQ5T6X5 926 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 CNSTQ6PJW8 725 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 PHYKPLQ8IUZ5 450 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 PELI3Q8N2H9 469 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 PNPLA1Q8N8W4 532 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 PLA2G15Q8NCC3 412 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms