RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 IGHV4-30-4P0DP06 118 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF12P17014 697 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 HOXC9P31274 260 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 STX2P32856 288 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 CTNNA1P35221 906 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SEC61A1P61619 476 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 LTBQ06643 244 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 AIMP2Q13155 320 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 IL11RAQ14626 422 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 COG2Q14746 738 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ADIPOQQ15848 244 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 EIF2S3LQ2VIR3 472 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF805Q5CZA5 627 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 C9orf152Q5JTZ5 239 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 HECTD3Q5T447 861 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 IL27RAQ6UWB1 636 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 B3GNT6Q6ZMB0 384 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 MFSD6Q6ZSS7 791 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 DPPA4Q7L190 304 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 TAOK1Q7L7X3 1001 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SDCCAG8Q86SQ7 713 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 FJX1Q86VR8 437 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 RNF168Q8IYW5 571 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SYT2Q8N9I0 419 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 MCUQ8NE86 351 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 GOT1L1Q8NHS2 421 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 WFIKKN2Q8TEU8 576 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ZFAND2BQ8WV99 257 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 TEKT4Q8WW24 435 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF479Q96JC4 524 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 HARBI1Q96MB7 349 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SMC6Q96SB8 1091 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SEPT5Q99719 369 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ADPGKQ9BRR6 497 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 PCGF1Q9BSM1 259 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SEZ6LQ9BYH1 1024 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 RSPH9Q9H1X1 276 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SLCO5A1Q9H2Y9 848 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ST6GALNAC4Q9H4F1 302 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 PPP1R3EQ9H7J1 279 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 DNAJC18Q9H819 358 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 C17orf75Q9HAS0 396 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 CNGB3Q9NQW8 809 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 WSB2Q9NYS7 404 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SLC9A2Q9UBY0 812 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 RCOR1Q9UKL0 485 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 PROCRQ9UNN8 238 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 LACTBL1A8MY62 500 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 OGG1O15527 345 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 DAB1O75553 588 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 TGDSO95455 350 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 C22orf31O95567 290 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 PRSS2P07478 247 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 NGFRP08138 427 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ACAA1P09110 424 aaPredicted RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 FCGR1AP12314 374 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 TRIM21P19474 475 aaKnown RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 MUTP22033 750 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ITGB8P26012 769 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 FASLGP48023 281 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 MRPS5P82675 430 aaKnown RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ZXDBP98169 803 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 GRSF1Q12849 480 aaKnown RBP eCLIP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 GRAPQ13588 217 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 KCNC3Q14003 757 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 DHX34Q14147 1143 aaKnown RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 KRT33BQ14525 404 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 NFATC4Q14934 902 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 HLFQ16534 295 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF585BQ52M93 769 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 SETMARQ53H47 684 aaPredicted RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF628Q5EBL2 1059 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 PMS2CLQ68D20 193 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 SIGIRRQ6IA17 410 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 C18orf65Q6ZTR6 163 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 CACNA2D4Q7Z3S7 1137 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ADGRA1Q86SQ6 560 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 SPATA2LQ8IUW3 424 aaPredicted RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 HACE1Q8IYU2 909 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 NKAIN3Q8N8D7 197 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 MAGEC3Q8TD91 643 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 DUSP19Q8WTR2 217 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 ACOX2Q99424 681 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 GPATCH1Q9BRR8 931 aaKnown RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 PCDH9Q9HC56 1237 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 CD93Q9NPY3 652 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 SELENONQ9NZV5 590 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 COPG2Q9UBF2 871 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 TINAGQ9UJW2 476 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 TTC7AQ9ULT0 858 aaPredicted RBP3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 CLIC4Q9Y696 253 aa3.23□□□□□ -1.89
SHCBP1-202ENST00000563219 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 LOC102723996A0A087X1L8 192 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 A0A1W2PR77 199 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TRBC2A0A5B9 178 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 hDV102S1A0JD36 115 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 GOLGA6L9A6NEM1 432 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 CDRT15L2A8MXV6 281 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms