RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ADGRG6Q86SQ4 1221 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PTRH1Q86Y79 214 aaKnown RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CTNNBL1Q8WYA6 563 aaPredicted RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 IMP4Q96G21 291 aaKnown RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF830Q96NB3 372 aaPredicted RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PLEKHG4BQ96PX9 1271 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZPBPQ9BS86 351 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 OSGEPL1Q9H4B0 414 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TRIM39Q9HCM9 518 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KLC4Q9NSK0 619 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC23A2Q9UGH3 650 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SHOC2Q9UQ13 582 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 LRRD1A4D1F6 860 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 LILRA5A6NI73 299 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 OR5K4A6NMS3 321 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CHUKO15111 745 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CAPN5O15484 640 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC25A14O95258 325 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 DLGAP3O95886 979 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC4A1P02730 911 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PRKAR1AP10644 381 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CCR10P46092 362 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TLE1Q04724 770 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 AP1B1Q10567 949 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CDC20Q12834 499 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 MESDQ14696 234 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ASTE1Q2TB18 679 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PLA2G4EQ3MJ16 856 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC9A4Q6AI14 798 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CRTC3Q6UUV7 619 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NPNTQ6UXI9 565 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TMC3Q7Z5M5 1100 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TADA1Q96BN2 335 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 AGAP3Q96P47 875 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZSCAN5AQ9BUG6 496 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 EPB41L1Q9H4G0 881 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 MAGEE1Q9HCI5 957 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF624Q9P2J8 865 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NFKBIL1Q9UBC1 381 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 LCMT1Q9UIC8 334 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TUBD1Q9UJT1 453 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF711Q9Y462 761 aa16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF106Q9H2Y7 1883 aaKnown RBP16.47■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 FLNCQ14315 2725 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PRR19A6NJB7 356 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF487B1APH4 448 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GPR89AB7ZAQ6 455 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 POLR1CO15160 346 aaPredicted RBP16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 C9P02748 559 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ANKRD34CP0C6C1 535 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GPR89BP0CG08 455 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 XRCC1P18887 633 aaPredicted RBP16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ABHD18Q0P651 414 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PCSK7Q16549 785 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 B4GALNT4Q76KP1 1039 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NT5DC3Q86UY8 548 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF547Q8IVP9 402 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TRAM1L1Q8N609 369 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 AVL9Q8NBF6 648 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GLYATL1Q969I3 302 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KIAA1143Q96AT1 154 aaPredicted RBP16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 C9orf72Q96LT7 481 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 OLFM3Q96PB7 478 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 UCK1Q9HA47 277 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC30A1Q9Y6M5 507 aa16.46■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 AURKAO14965 403 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MTX2O75431 263 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MTA2O94776 668 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MT-CYBP00156 380 aaPredicted RBP16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TMEM253P0C7T8 217 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 BRAFP15056 766 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 BPIP17213 487 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TYRP1P17643 537 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 OAS2P29728 719 aaKnown RBP16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SLC19A1P41440 591 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 STAT5AP42229 794 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CDK18Q07002 472 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SEPT7Q16181 437 aaKnown RBP16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 INSCQ1MX18 579 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PDPK2PQ6A1A2 396 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TMEM26Q6ZUK4 368 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PLXDC1Q8IUK5 500 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SPATA22Q8NHS9 363 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 STARD8Q92502 1023 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RNF31Q96EP0 1072 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SLC25A51Q9H1U9 297 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 EPN3Q9H201 632 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TMPRSS11EQ9UL52 423 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DNAJC16Q9Y2G8 782 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SPO11Q9Y5K1 396 aa16.45■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 GOLGA6L19H0YKK7 550 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 APOL1O14791 398 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 KMOO15229 486 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 UBXN7O94888 489 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 VIPP01282 170 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ZNF28P17035 718 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ZNF7P17097 686 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms