RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 VMP1Q96GC9 406 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 FUBP3Q96I24 572 aaKnown RBP eCLIP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CEP295NLQ96MC4 621 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ZNF641Q96N77 438 aaPredicted RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 NPAS2Q99743 824 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 PAAF1Q9BRP4 392 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 MCMBPQ9BTE3 642 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 MROQ9BYG7 248 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ZBP1Q9H171 429 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 DPEP3Q9H4B8 488 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 EHD1Q9H4M9 534 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 POPDC3Q9HBV1 291 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CSNK1G1Q9HCP0 422 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 IARS2Q9NSE4 1012 aaKnown RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 FAM49BQ9NUQ9 324 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 RIC8BQ9NVN3 520 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 SEPT10Q9P0V9 454 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CLEC1BQ9P126 229 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 XPR1Q9UBH6 696 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 SUN2Q9UH99 717 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ZDHHC2Q9UIJ5 367 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CD207Q9UJ71 328 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 TSC22D4Q9Y3Q8 395 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 IRAK3Q9Y616 596 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 TTC24A2A3L6 582 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KCNU1A8MYU2 1149 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 PFDN6O15212 129 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SORBS2O94875 1100 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 GLP2RO95838 553 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SOD2P04179 222 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 FGF4P08620 206 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 INHBBP09529 407 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 IL9P15248 144 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 TFE3P19532 575 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 IMPDH1P20839 514 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 FGFR3P22607 806 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 EEF1B2P24534 225 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 ADORA2BP29275 332 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 MAGEA11P43364 429 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 BRCC3P46736 316 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 EIF2B2P49770 351 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SULT1E1P49888 294 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 CCT8P50990 548 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 ALDH3A2P51648 485 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KCNK10P57789 538 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 TPI1P60174 286 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 MVKQ03426 396 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 CBX2Q14781 532 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 OXA1LQ15070 435 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KIF19Q2TAC6 998 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 FAM98BQ52LJ0 330 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 C1QTNF12Q5T7M4 302 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 ATAD3BQ5T9A4 648 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 DEPDC1Q5TB30 811 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 AGAP7PQ5VUJ5 663 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 GPR107Q5VW38 600 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KIAA0930Q6ICG6 404 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 ZNF280DQ6N043 979 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KIAA1841Q6NSI8 718 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 PMF1Q6P1K2 205 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 NAPRTQ6XQN6 538 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 TMEM184AQ6ZMB5 413 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 PAQR9Q6ZVX9 377 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 ANKS3Q6ZW76 656 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 CUZD1Q86UP6 607 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 FAM35AQ86V20 835 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 PTRH1Q86Y79 214 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KLHDC8BQ8IXV7 354 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 C8orf59Q8N0T1 100 aaPredicted RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SETD9Q8NE22 299 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 OR52K1Q8NGK4 314 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 DNAJB8Q8NHS0 232 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SLC35B4Q969S0 331 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 L3HYPDHQ96EM0 354 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 PCED1BQ96HM7 432 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 MSLNLQ96KJ4 702 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 TSGA13Q96PP4 275 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 PKMYT1Q99640 499 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SH3GL1Q99961 368 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 RTP3Q9BQQ7 232 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 DCUN1D5Q9BTE7 237 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 MED10Q9BTT4 135 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 VN1R3Q9BXE9 311 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 NUSAP1Q9BXS6 441 aaKnown RBP8.5□□□□□ -1.05
CCDC33-209ENST00000560565 UGT2B28Q9BY64 529 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 B3GNT5Q9BYG0 378 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 KCNH6Q9H252 994 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SEMA6AQ9H2E6 1030 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 POMKQ9H5K3 350 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 SP140LQ9H930 580 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 CRTAC1Q9NQ79 661 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 NECTIN3Q9NQS3 549 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 CNGB3Q9NQW8 809 aa8.5□□□□□ -1.05
CCDC33-209ENST00000560565 MRPL17Q9NRX2 175 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms