RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 RNPS1Q15287 305 aaKnown RBP2.3□□□□□ -2.04
SPG11-222ENST00000560435 FASTKD1Q53R41 847 aaKnown RBP2.3□□□□□ -2.04
SPG11-222ENST00000560435 ASPRV1Q53RT3 343 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 C2CD6Q53TS8 623 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 ZNF766Q5HY98 468 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 PACS1Q6VY07 963 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 QSOX2Q6ZRP7 698 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 Q6ZSR9 355 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 RAPH1Q70E73 1250 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 ADGRG6Q86SQ4 1221 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 AFG1LQ8WV93 481 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 DNAAF4Q8WXU2 420 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 GIMAP5Q96F15 307 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 PRMT6Q96LA8 375 aaPredicted RBP2.3□□□□□ -2.04
SPG11-222ENST00000560435 CRB3Q9BUF7 120 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 RAB11FIP5Q9BXF6 653 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 TRIM6Q9C030 488 aaPredicted RBP2.3□□□□□ -2.04
SPG11-222ENST00000560435 APOBEC3GQ9HC16 384 aaKnown RBP2.3□□□□□ -2.04
SPG11-222ENST00000560435 TRPC7Q9HCX4 862 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 IGHV4-4A0A075B6R2 117 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 VWA3AA6NCI4 1184 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 TNPO2O14787 897 aaKnown RBP2.29□□□□□ -2.04
SPG11-222ENST00000560435 BCL2L11O43521 198 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 TRMUO75648 421 aaKnown RBP2.29□□□□□ -2.04
SPG11-222ENST00000560435 RAF1P04049 648 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 CNPP09543 421 aaKnown RBP2.29□□□□□ -2.04
SPG11-222ENST00000560435 IRF1P10914 325 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 ANXA7P20073 488 aaKnown RBP2.29□□□□□ -2.04
SPG11-222ENST00000560435 GNALP38405 381 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 APOBEC1P41238 236 aaKnown RBP2.29□□□□□ -2.04
SPG11-222ENST00000560435 LIMK2P53671 638 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 EFNB1P98172 346 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 MS4A2Q01362 244 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 ARHGEF16Q5VV41 709 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 SIGIRRQ6IA17 410 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 GPRIN3Q6ZVF9 776 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 CACNA2D4Q7Z3S7 1137 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 ISCA2Q86U28 154 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 PLD5Q8N7P1 536 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 USP38Q8NB14 1042 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 TNIP2Q8NFZ5 429 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 APBB2Q92870 758 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 NOD2Q9HC29 1040 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 ACSS1Q9NUB1 689 aaPredicted RBP2.29□□□□□ -2.04
SPG11-222ENST00000560435 SLC38A7Q9NVC3 462 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 KIF17Q9P2E2 1029 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 DNAJB4Q9UDY4 337 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 EPHA6Q9UF33 1036 aa2.29□□□□□ -2.04
SPG11-222ENST00000560435 GOLGA6L10A0A0M3HER8 536 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 FAM90A26D6RGX4 464 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 VCYO14598 125 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 ANKRD28O15084 1053 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 KCNN4O15554 427 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 KLK10O43240 276 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 SYNCRIPO60506 623 aaKnown RBP2.28□□□□□ -2.04
SPG11-222ENST00000560435 SETSIPP0DME0 302 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 VEGFAP15692 232 aaPredicted RBP2.28□□□□□ -2.04
SPG11-222ENST00000560435 UGT1A1P22309 533 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 ANKRD1Q15327 319 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 TMEM81Q6P7N7 255 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 RUFY2Q8WXA3 655 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 LTV1Q96GA3 475 aaPredicted RBP2.28□□□□□ -2.04
SPG11-222ENST00000560435 OXNAD1Q96HP4 312 aaPredicted RBP2.28□□□□□ -2.04
SPG11-222ENST00000560435 RHNO1Q9BSD3 238 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 TRAF4Q9BUZ4 470 aaPredicted RBP2.28□□□□□ -2.04
SPG11-222ENST00000560435 LRRC61Q9BV99 259 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 ECHDC1Q9NTX5 307 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 C20orf141Q9NUB4 165 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 KLHL9Q9P2J3 617 aa2.28□□□□□ -2.04
SPG11-222ENST00000560435 SEC14L5O43304 696 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 TACC1O75410 805 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 DUS4LO95620 317 aaKnown RBP2.27□□□□□ -2.05
SPG11-222ENST00000560435 NGFP01138 241 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 TFAP2AP05549 437 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 HNF4AP41235 474 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 GPD2P43304 727 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 GABRB2P47870 512 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 FOXD4Q12950 439 aaPredicted RBP2.27□□□□□ -2.05
SPG11-222ENST00000560435 DUOXA1Q1HG43 343 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 CCDC38Q502W7 563 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 PAPD4Q6PIY7 484 aaKnown RBP2.27□□□□□ -2.05
SPG11-222ENST00000560435 Q75L30 129 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 KRTAP11-1Q8IUC1 163 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 SUGP1Q8IWZ8 645 aaKnown RBP2.27□□□□□ -2.05
SPG11-222ENST00000560435 ABCB10Q9NRK6 738 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 HSPB7Q9UBY9 170 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 LIMA1Q9UHB6 759 aaKnown RBP2.27□□□□□ -2.05
SPG11-222ENST00000560435 CEPT1Q9Y6K0 416 aa2.27□□□□□ -2.05
SPG11-222ENST00000560435 SOS1Q07889 1333 aaPredicted RBP2.26□□□□□ -2.05
SPG11-222ENST00000560435 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.26□□□□□ -2.05
SPG11-222ENST00000560435 IRAK2O43187 625 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 CAND2O75155 1236 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 HOXB5P09067 269 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 UGT1A4P22310 534 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 MAD2L1Q13257 205 aaPredicted RBP2.26□□□□□ -2.05
SPG11-222ENST00000560435 USP41Q3LFD5 358 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 TAF1BQ53T94 588 aaPredicted RBP2.26□□□□□ -2.05
SPG11-222ENST00000560435 FAM198BQ6UWH4 519 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 SLC34A3Q8N130 599 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 Q8N7P7 452 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms