RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CADM4Q8NFZ8 388 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 OR6P1Q8NGX9 317 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 GAB3Q8WWW8 586 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 ASB12Q8WXK4 309 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 KLK6Q92876 244 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 ATXN7L3BQ96GX2 97 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 CDKN2AIPNLQ96HQ2 116 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 IQCGQ9H095 443 aaKnown RBP16.42■□□□□ 0.22
TPM1-219ENST00000559397 PCED1AQ9H1Q7 454 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 ZSCAN32Q9NX65 697 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 PKD2L2Q9NZM6 624 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 DCDC2Q9UHG0 476 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 PKP3Q9Y446 797 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 PLXNA2O75051 1894 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 ABCA7Q8IZY2 2146 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 GOLGA8CPA6NN73 597 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 CCL22O00626 93 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 HRO43593 1189 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 NDUFS2O75306 463 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 HAUS5O94927 633 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 PAK4O96013 591 aaPredicted RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 GOT2P00505 430 aaKnown RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 VIMP08670 466 aaKnown RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 MAT2AP31153 395 aaKnown RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 TMPRSS15P98073 1019 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 ILF2Q12905 390 aaKnown RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 SRSF5Q13243 272 aaKnown RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 PPM1JQ5JR12 505 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 PTAR1Q7Z6K3 402 aaPredicted RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 CLEC14AQ86T13 490 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 GPR26Q8NDV2 337 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 SCG3Q8WXD2 468 aaKnown RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 ABCG8Q9H221 673 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 EBF2Q9HAK2 575 aa16.41■□□□□ 0.22
TPM1-219ENST00000559397 MARCH4Q9P2E8 410 aaPredicted RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 NFKBIL1Q9UBC1 381 aaPredicted RBP16.41■□□□□ 0.22
TPM1-219ENST00000559397 METTL12A8MUP2 240 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 H7C0S8 307 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 S1PR4O95977 384 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 C2P06681 752 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 GSTA1P08263 222 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 SERPINB4P48594 390 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 DCDC1P59894 354 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 RPL6Q02878 288 aaKnown RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 ZSCAN26Q16670 478 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 CPLX4Q7Z7G2 160 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 BIRC7Q96CA5 298 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 ORAI3Q9BRQ5 295 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 FAM107BQ9H098 131 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 SUDS3Q9H7L9 328 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 CAB39LQ9H9S4 337 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 CD84Q9UIB8 345 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 EMCNQ9ULC0 261 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 SLC39A10Q9ULF5 831 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 CUL9Q8IWT3 2517 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 A0A096LPK6 155 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 OR51F1A6NGY5 319 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 GAPDHSO14556 408 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 CD3EAPO15446 510 aaKnown RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 FSBPO95073 299 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 TOP3BO95985 862 aaKnown RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 CNR2P34972 360 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 SPAM1P38567 509 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 XIAPP98170 497 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 DMTNQ08495 405 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 PEX6Q13608 980 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 ZKSCAN8Q15776 578 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 MRNIPQ6NTE8 343 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 CNSTQ6PJW8 725 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 ZNF765Q7L2R6 523 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 C11orf74Q86VG3 221 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 NLRP8Q86W28 1048 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 SLC41A1Q8IVJ1 513 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 DEFB119Q8N690 84 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 SCAMP4Q969E2 229 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 NUS1Q96E22 293 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 LENG8Q96PV6 779 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 PLEKHG4BQ96PX9 1271 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 DUSP15Q9H1R2 295 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 FAM83DQ9H4H8 585 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 IL26Q9NPH9 171 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 FBXO6Q9NRD1 293 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.4■□□□□ 0.22
TPM1-219ENST00000559397 FKBPLQ9UIM3 349 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 MYO15AQ9UKN7 3530 aa16.4■□□□□ 0.22
TPM1-219ENST00000559397 FAM95CA0A1B0GW59 222 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 RAD51BO15315 384 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 MAP3K13O43283 966 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 PLIN3O60664 434 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 LILRB5O75023 590 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 PTPN5P54829 565 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 POU4F1Q01851 419 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 DPTQ07507 201 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 SGCGQ13326 291 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms