RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 TMEM199Q8N511 208 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 GOLM1Q8NBJ4 401 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 PDZD8Q8NEN9 1154 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 OR13F1Q8NGS4 319 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ARRDC2Q8TBH0 407 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 PPM1MQ96MI6 270 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 CDK15Q96Q40 435 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 AIG1Q9NVV5 245 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 PCDHGA11Q9Y5H2 935 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 TNPO2O14787 897 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 RHOBTB1O94844 696 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ITGB1P05556 798 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 C7P10643 843 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 MBL2P11226 248 aaPredicted RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 ODC1P11926 461 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 MTPNP58546 118 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 FOXM1Q08050 763 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 RBBP7Q16576 425 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 IMPG1Q17R60 797 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ANKRD34AQ69YU3 496 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 STK32CQ86UX6 486 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 FNDC5Q8NAU1 212 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 TMBIM1Q969X1 311 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 SEMA3CQ99985 751 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ACBD6Q9BR61 282 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 BDH2Q9BUT1 245 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ASB1Q9Y576 335 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ACTL7AQ9Y615 435 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 DGKBQ9Y6T7 804 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 NPEPPSL1A6NEC2 478 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 MUSKO15146 869 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 EEDO75530 441 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 BCL10O95999 233 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ARL1P40616 181 aaPredicted RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 CDKN1CP49918 316 aaPredicted RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 ARSFP54793 590 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 SETMARQ53H47 684 aaPredicted RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 MRNIPQ6NTE8 343 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 METTL23Q86XA0 190 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 COLGALT2Q8IYK4 626 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 HS3ST5Q8IZT8 346 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 OR4L1Q8NH43 312 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 RHEBL1Q8TAI7 183 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 NSMCE2Q96MF7 247 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 SMIM14Q96QK8 99 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 AARSD1Q9BTE6 412 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 TFB2MQ9H5Q4 396 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 CATSPERZQ9NTU4 200 aa11.3□□□□□ -0.6
SRP54-213ENST00000556994 TSR3Q9UJK0 312 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
SRP54-213ENST00000556994 TRIM64BA6NI03 449 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 UPK1AO00322 258 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 NOBOXO60393 691 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SNX2O60749 519 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 KERAO60938 352 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 CPNE6O95741 557 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 TBX18O95935 607 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 HMBSP08397 361 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 UMPSP11172 480 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 MAGEA8P43361 318 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 GPR15P49685 360 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRP54-213ENST00000556994 AASDHQ4L235 1098 aaPredicted RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 COQ5Q5HYK3 327 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 EGFLAMQ63HQ2 1017 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 R3HCC1LQ7Z5L2 792 aaKnown RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 SPATA19Q7Z5L4 167 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SFRP1Q8N474 314 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 DTWD1Q8N5C7 304 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 CDYL2Q8N8U2 506 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 PROKR1Q8TCW9 393 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 OSCP1Q8WVF1 389 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 IGSF8Q969P0 613 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 ZNF599Q96NL3 588 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 HGH1Q9BTY7 390 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 DGCR6LQ9BY27 220 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SMURF2Q9HAU4 748 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 WARS2Q9UGM6 360 aaKnown RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 ZNF639Q9UID6 485 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 MED16Q9Y2X0 877 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 LOC285095A0A1B0GVY8 99 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 CFAP99D6REC4 459 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 BTN3A1O00481 513 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms