RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PDS5AQ29RF7 1337 aaKnown RBP6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 A0A0G2JMZ2 1700 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 PARP14Q460N5 1801 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 A0A1B0GUL7 405 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 SLU7O95391 586 aaKnown RBP6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 CAPN2P17655 700 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 BMP7P18075 431 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 IL15P40933 162 aaPredicted RBP6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 IL11RAQ14626 422 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 E2F5Q15329 346 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 IGSF11Q5DX21 431 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 ZNF585AQ6P3V2 769 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 SHQ1Q6PI26 577 aaKnown RBP6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 SEPT14Q6ZU15 432 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 GPR142Q7Z601 462 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 TBC1D26Q86UD7 250 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 TRIM74Q86UV6 250 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 TRIM73Q86UV7 250 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 MMP21Q8N119 569 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 ARL10Q8N8L6 244 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 NAT8LQ8N9F0 302 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 SNX21Q969T3 373 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 GBP5Q96PP8 586 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 MEIS3Q99687 375 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 ARL8BQ9NVJ2 186 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 TUBE1Q9UJT0 475 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 OSGIN1Q9UJX0 560 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 PLAGL1Q9UM63 463 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 CARD8Q9Y2G2 431 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 CMAHPQ9Y471 501 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 TCAF1Q9Y4C2 921 aa6.24□□□□□ -1.41
TGFBR1-208ENST00000550253 CHD7Q9P2D1 2997 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 A0A1B0GVM2 712 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 CXorf65A6NEN9 183 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 EBAG9O00559 213 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 GOSR1O95249 250 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 ZNF182P17025 639 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 HOXA7P31268 230 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 PTGER1P34995 402 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 CENPAP49450 140 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 SELENOPP49908 381 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 SUOXP51687 545 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 BACE1P56817 501 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 ACSM2AQ08AH3 577 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 NAB2Q15742 525 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 PFKFB3Q16875 520 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 MMEL1Q495T6 779 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 AWAT1Q58HT5 328 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 C9orf50Q5SZB4 431 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 ACSM2BQ68CK6 577 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 RBPMS2Q6ZRY4 209 aaKnown RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 C1orf210Q8IVY1 113 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 TRPV1Q8NER1 839 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 KIF18AQ8NI77 898 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 PTPMT1Q8WUK0 201 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 EXTL1Q92935 676 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 CCDC17Q96LX7 622 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 CFAP57Q96MR6 1250 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 THUMPD3Q9BV44 507 aaKnown RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 HIPK3Q9H422 1215 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 PSD3Q9NYI0 1048 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 AMACRQ9UHK6 382 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 ST3GAL5Q9UNP4 418 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 EXO1Q9UQ84 846 aaKnown RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 LSM4Q9Y4Z0 139 aaKnown RBP6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 ZNF236Q9UL36 1845 aa6.23□□□□□ -1.41
TGFBR1-208ENST00000550253 COL11A1P12107 1806 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 CCDC151A5D8V7 595 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 SLC25A17O43808 307 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 FYNP06241 537 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 TPOP07202 933 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 UBTFL1P0CB47 393 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 DRD4P21917 467 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 ATP5F1P24539 256 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 CFPP27918 469 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 HOXC8P31273 242 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 SHMT1P34896 483 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 BLOC1S1P78537 153 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 ZNF124Q15973 351 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 SYTL3Q4VX76 610 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 KIAA1755Q5JYT7 1200 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 CST9LP1Q5W188 147 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 FAM109BQ6ICB4 259 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 LRRC8EQ6NSJ5 796 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 CAVIN1Q6NZI2 390 aaKnown RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 C1QL4Q86Z23 238 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 RNF168Q8IYW5 571 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 NUP93Q8N1F7 819 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 FAM47BQ8NA70 645 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 XXYLT1Q8NBI6 393 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 GPRC5AQ8NFJ5 357 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 KAT2AQ92830 837 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 DAZAP1Q96EP5 407 aaKnown RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 GAD1Q99259 594 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 CDX2Q99626 313 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 C1QTNF1Q9BXJ1 281 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 FAM129AQ9BZQ8 928 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms