RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 CACNG1Q06432 222 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 TMEM115Q12893 351 aaPredicted RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 PTK6Q13882 451 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 DHX34Q14147 1143 aaKnown RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 TRIP13Q15645 432 aaPredicted RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 PCID2Q5JVF3 399 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 GPRC6AQ5T6X5 926 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 SYT10Q6XYQ8 523 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 MARK2Q7KZI7 788 aaKnown RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 SLCO6A1Q86UG4 719 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 NRROSQ86YC3 692 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 SLC35F3Q8IY50 421 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 C17orf53Q8N3J3 647 aaPredicted RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 AVL9Q8NBF6 648 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 FAM46DQ8NEK8 389 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 GPR156Q8NFN8 814 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 WDR48Q8TAF3 677 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 CDKN2AIPNLQ96HQ2 116 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 MRM3Q9HC36 420 aaKnown RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 TAAR2Q9P1P5 351 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 TMPRSS11EQ9UL52 423 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 KCTD3Q9Y597 815 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 DNMT3AQ9Y6K1 912 aaPredicted RBP17.67■□□□□ 0.42
TSFM-208ENST00000543727 U3KQA8 63 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 PIKFYVEQ9Y2I7 2098 aa17.67■□□□□ 0.42
TSFM-208ENST00000543727 TRBV5-4A0A0C4DH59 114 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 CFAP99D6REC4 459 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 SMAPO00193 183 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 NDC80O14777 642 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 PNLIPP16233 465 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 MC4RP32245 332 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 ACTR1BP42025 376 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 GRIA1P42261 906 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 VPS41P49754 854 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 ACTR1AP61163 376 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 DNAJC3Q13217 504 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 PTPRCAPQ14761 206 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 CERCAMQ5T4B2 595 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 TSTD2Q5T7W7 516 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 PPIL6Q8IXY8 311 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 CACTIN-AS1Q8N1I8 211 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 NXPE1Q8N323 547 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 KYQ8NBH2 561 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 CPT1BQ92523 772 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.66■□□□□ 0.42
TSFM-208ENST00000543727 DPEP2Q9H4A9 486 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 PIH1D1Q9NWS0 290 aaKnown RBP17.66■□□□□ 0.42
TSFM-208ENST00000543727 CRLS1Q9UJA2 301 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 PADI4Q9UM07 663 aa17.66■□□□□ 0.42
TSFM-208ENST00000543727 OR5K4A6NMS3 321 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 ZW10O43264 779 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 NUDT21O43809 227 aaKnown RBP17.65■□□□□ 0.42
TSFM-208ENST00000543727 GLB1P16278 677 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 MSH3P20585 1137 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 AKT1P31749 480 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 DR1Q01658 176 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 SMAD1Q15797 465 aaKnown RBP17.65■□□□□ 0.42
TSFM-208ENST00000543727 C14orf28Q4W4Y0 310 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 LYPLAL1Q5VWZ2 237 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 SLC30A9Q6PML9 568 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 AFTPHQ6ULP2 937 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 CHST15Q7LFX5 561 aaPredicted RBP17.65■□□□□ 0.42
TSFM-208ENST00000543727 HOOK3Q86VS8 718 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 C17orf82Q86X59 251 aaPredicted RBP17.65■□□□□ 0.42
TSFM-208ENST00000543727 OR13J1Q8NGT2 312 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 CCL4L1Q8NHW4 92 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 IFI44Q8TCB0 444 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 DCUN1D1Q96GG9 259 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 TTC1Q99614 292 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 CAAP1Q9H8G2 361 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 ASIC3Q9UHC3 531 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 SPTBN2O15020 2390 aa17.65■□□□□ 0.42
TSFM-208ENST00000543727 IGLV3-16A0A075B6K0 115 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 MED19A0JLT2 244 aaPredicted RBP17.64■□□□□ 0.41
TSFM-208ENST00000543727 FAM221BA6H8Z2 402 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 NOBOXO60393 691 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 UGT1A9O60656 530 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 GSTM1P09488 218 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 ZNF7P17097 686 aaPredicted RBP17.64■□□□□ 0.41
TSFM-208ENST00000543727 UGT1A6P19224 532 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 UGT1A1P22309 533 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 UGT1A4P22310 534 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 ACRV1P26436 265 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 AK4P27144 223 aaPredicted RBP17.64■□□□□ 0.41
TSFM-208ENST00000543727 UGT1A3P35503 534 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 UGT1A5P35504 534 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 PPARGP37231 505 aaPredicted RBP17.64■□□□□ 0.41
TSFM-208ENST00000543727 SESN2P58004 480 aaPredicted RBP17.64■□□□□ 0.41
TSFM-208ENST00000543727 PRAMEP78395 509 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 GSTM4Q03013 218 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 DMPKQ09013 629 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 ITIH4Q14624 930 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 INSCQ1MX18 579 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 KHDC1Q4VXA5 237 aaKnown RBP17.64■□□□□ 0.41
TSFM-208ENST00000543727 CCDC38Q502W7 563 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 CERS6Q6ZMG9 384 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 ZNF534Q76KX8 674 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 TMPRSS12Q86WS5 348 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 TRAPPC5Q8IUR0 188 aa17.64■□□□□ 0.41
TSFM-208ENST00000543727 ZDHHC1Q8WTX9 485 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms