RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TTC29Q8NA56 475 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TSC22D3Q99576 134 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SFXN1Q9H9B4 322 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CCDC177Q9NQR7 707 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 GGA2Q9UJY4 613 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 FZD10Q9ULW2 581 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 LRP6O75581 1613 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 EME2A4GXA9 379 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 WNT9AO14904 365 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 AZIN1O14977 448 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 STK16O75716 305 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NOL4O94818 638 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 MT-CYBP00156 380 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 C1DQ13901 141 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CCDC142Q17RM4 750 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ANO7Q6IWH7 933 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF567Q8N184 647 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ART4Q93070 314 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 GPR21Q99679 349 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ADI1Q9BV57 179 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SUV39H2Q9H5I1 410 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 C3orf14Q9HBI5 128 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SGK2Q9HBY8 427 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 DNAJC28Q9NX36 388 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 AASSQ9UDR5 926 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 BTRCQ9Y297 605 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ALOX15BO15296 676 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF865P0CJ78 1059 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CYBAP13498 195 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CDH13P55290 713 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 GRM2Q14416 872 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SYT16Q17RD7 645 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 UAP1L1Q3KQV9 507 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 LRRC73Q5JTD7 316 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 LDLRAP1Q5SW96 308 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 RNASEH2BQ5TBB1 312 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 HECTD2Q5U5R9 776 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SYPL2Q5VXT5 272 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 LIPMQ5VYY2 423 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 FBXL22Q6P050 247 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZBTB49Q6ZSB9 765 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CMC1Q7Z7K0 106 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CDH24Q86UP0 819 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SERPINA9Q86WD7 417 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF786Q8N393 782 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ATXN2LQ8WWM7 1075 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 DNAJC9Q8WXX5 260 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NKD2Q969F2 451 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ABTB1Q969K4 478 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PPCDCQ96CD2 204 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 RNF145Q96MT1 663 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SRMSQ9H3Y6 488 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 EBF3Q9H4W6 596 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CARS2Q9HA77 564 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 FBXL12Q9NXK8 326 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SCML2Q9UQR0 700 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ANGPT4Q9Y264 503 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SDK1Q7Z5N4 2213 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 EDDM13A0A1B0GTR0 161 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CNOT3O75175 753 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 RECQL5O94762 991 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TYRP14679 529 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 KCNA3P22001 575 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SERPINB3P29508 390 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NSG1P42857 185 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ENPP7Q6UWV6 458 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 GDPD4Q6W3E5 623 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ITFG1Q8TB96 612 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TRMOQ9BU70 441 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PNO1Q9NRX1 252 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 IL36AQ9UHA7 158 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NOCTQ9UK39 431 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TCAF1Q9Y4C2 921 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CPED1A4D0V7 1026 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 PIAS1O75925 651 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 CD48P09326 243 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 H2AFXP16104 143 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 BUD31P41223 144 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 STT3AP46977 705 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 KCNQ1P51787 676 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 JAM2P57087 298 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 RALGDSQ12967 914 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 AMZ1Q400G9 498 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 ARSIQ5FYB1 569 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 HGSNATQ68CP4 663 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 DUPD1Q68J44 220 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 MSANTD2Q6P1R3 559 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 UNC5DQ6UXZ4 953 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 KIAA0408Q6ZU52 694 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 RNF44Q7L0R7 432 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 PCDH20Q8N6Y1 951 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 RNF148Q8N7C7 305 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF366Q8N895 744 aa6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 AENQ8WTP8 325 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-206ENST00000543397 CYB5D2Q8WUJ1 264 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms