RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TXNDC9O14530 226 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 PFDN6O15212 129 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 AP1G1O43747 822 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 PTGER3P43115 390 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 HK3P52790 923 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 PSME3P61289 254 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 AP1S1P61966 158 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 LRP8Q14114 963 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 LIN52Q52LA3 116 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 THEMIS2Q5TEJ8 643 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 KANK2Q63ZY3 851 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 TICAM1Q8IUC6 712 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 CPNE9Q8IYJ1 553 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 ADCY4Q8NFM4 1077 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
VPS33B-202ENST00000535906 KCNJ9Q92806 393 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 CENPKQ9BS16 269 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 SARS2Q9NP81 518 aaKnown RBP13.26□□□□□ -0.29
VPS33B-202ENST00000535906 MRPL40Q9NQ50 206 aaKnown RBP13.26□□□□□ -0.29
VPS33B-202ENST00000535906 CACNA2D2Q9NY47 1150 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
VPS33B-202ENST00000535906 PCDHGA7Q9Y5G6 932 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 KIAA1671Q9BY89 1806 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 TRIM43BA6NCK2 446 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SYCE1LA8MT33 242 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 E5RI56 91 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 FGF18O76093 207 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CD9P21926 228 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CA5AP35218 305 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CHN2P52757 468 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ADARP55265 1226 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 IL2P60568 153 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ECT2LQ008S8 904 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 LMAN2Q12907 356 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 LCP2Q13094 533 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 LRRC26Q2I0M4 334 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 AARS2Q5JTZ9 985 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 REP15Q6BDI9 236 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 RETSATQ6NUM9 610 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 PAOXQ6QHF9 649 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 HTR3DQ70Z44 454 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 LILRA2Q8N149 483 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 GALNT15Q8N3T1 639 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 MARVELD2Q8N4S9 558 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 FAM156AQ8NDB6 213 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ESAMQ96AP7 390 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ASB9Q96DX5 294 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 LINGO1Q96FE5 620 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ZBP1Q9H171 429 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 P2RY12Q9H244 342 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 COPS7BQ9H9Q2 264 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SARDHQ9UL12 918 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 A0A1W2PRU2 124 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 GAPDHSO14556 408 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 KLK8O60259 260 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ZNF821O75541 412 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ESR1P03372 595 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CAPNS1P04632 268 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SNRPB2P08579 225 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 RPS17P08708 135 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 TCN1P20061 433 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 PRDX3P30048 256 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CD70P32970 193 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CLCN7P51798 805 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 CACNG1Q06432 222 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 GRB7Q14451 532 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 TLR1Q15399 786 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ANKS6Q68DC2 871 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 FAM151BQ6UXP7 276 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 PHYKPLQ8IUZ5 450 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 FUNDC1Q8IVP5 155 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 DDIASQ8IXT1 998 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 KLHL32Q96NJ5 620 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SMG9Q9H0W8 520 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 TNKS2Q9H2K2 1166 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 Q9H521 79 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 ADA2Q9NZK5 511 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 EPS15L1Q9UBC2 864 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SUCOQ9UBS9 1254 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 INTS6Q9UL03 887 aaKnown RBP13.25□□□□□ -0.29
VPS33B-202ENST00000535906 RAB26Q9ULW5 256 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 MAFFQ9ULX9 164 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 BTRCQ9Y297 605 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SH3BP1Q9Y3L3 701 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 SLC30A1Q9Y6M5 507 aa13.25□□□□□ -0.29
VPS33B-202ENST00000535906 DNAJA2O60884 412 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 TIMP1P01033 207 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 LINC00032P0C843 101 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 GPX3P22352 226 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 SLC7A9P82251 487 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 UGT3A1Q6NUS8 523 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 ZFAND2BQ8WV99 257 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 ACDQ96AP0 544 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 RPL10LQ96L21 214 aaKnown RBP13.24□□□□□ -0.29
VPS33B-202ENST00000535906 ZNF225Q9UK10 706 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms