RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 LUC7LQ9NQ29 371 aaKnown RBP12.23□□□□□ -0.45
VEGFA-223ENST00000523125 KCNK4Q9NYG8 393 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 TMEM9Q9P0T7 183 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 KLHL8Q9P2G9 620 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PDP2Q9P2J9 529 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 SLC23A2Q9UGH3 650 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 EFR3BQ9Y2G0 817 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 GPR89AB7ZAQ6 455 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 C9orf172C9J069 976 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 K7ENP7 123 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 TK2O00142 265 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 PJA2O43164 708 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ZW10O43264 779 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 APOC2P02655 101 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 PRB1P04280 392 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 GPR89BP0CG08 455 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 FGF3P11487 239 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-223ENST00000523125 F3P13726 295 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 CTNNA2P26232 953 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 RBL1P28749 1068 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 PTPN7P35236 360 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ARSDP51689 593 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 HHEXQ03014 270 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 VAC14Q08AM6 782 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 BIRC2Q13490 618 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 SLC1A5Q15758 541 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ATP13A5Q4VNC0 1218 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 INO80CQ6PI98 192 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-223ENST00000523125 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ZNF547Q8IVP9 402 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 SLC25A41Q8N5S1 370 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 LSM14AQ8ND56 463 aaKnown RBP12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ACRBPQ8NEB7 543 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ACTL9Q8TC94 416 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 ALG3Q92685 438 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 CALR3Q96L12 384 aaKnown RBP12.22□□□□□ -0.45
VEGFA-223ENST00000523125 VPS35Q96QK1 796 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 TRABDQ9H4I3 376 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 SARS2Q9NP81 518 aaKnown RBP12.22□□□□□ -0.45
VEGFA-223ENST00000523125 IL26Q9NPH9 171 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 PRDM8Q9NQV8 689 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 FOXJ2Q9P0K8 574 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 IL17CQ9P0M4 197 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 TRHDEQ9UKU6 1024 aa12.22□□□□□ -0.45
VEGFA-223ENST00000523125 PIEZO2Q9H5I5 2752 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 A0A0U1RQJ8 604 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 CCDC66A2RUB6 948 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 GAPDHSO14556 408 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-223ENST00000523125 HGSO14964 777 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-223ENST00000523125 SNX2O60749 519 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 MTX2O75431 263 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 C1QL1O75973 258 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 THRAP10827 490 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 MPSTP25325 297 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 CA5AP35218 305 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 VAV2P52735 878 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 MAPK10P53779 464 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 GPLD1P80108 840 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 OTUD4Q01804 1114 aaKnown RBP12.21□□□□□ -0.45
VEGFA-223ENST00000523125 SRSF6Q13247 344 aaKnown RBP12.21□□□□□ -0.45
VEGFA-223ENST00000523125 MPP3Q13368 585 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 TRA2AQ13595 282 aaKnown RBP eCLIP12.21□□□□□ -0.452e-8■□□□□ 9.9
VEGFA-223ENST00000523125 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 TMEM71Q6P5X7 295 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 C11orf96Q7Z7L8 435 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 ZFAND4Q86XD8 727 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 IPMKQ8NFU5 416 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 PMEPA1Q969W9 287 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 CCNL2Q96S94 520 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-223ENST00000523125 SLC38A3Q99624 504 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 B3GNT4Q9C0J1 378 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 GBA3Q9H227 469 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 SCHIP1Q9P0W5 487 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-223ENST00000523125 CPNE7Q9UBL6 633 aa12.21□□□□□ -0.45
VEGFA-223ENST00000523125 KIR2DS5A0A0G2JLQ3 304 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 A0A0G2JNG1 304 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 OR5K4A6NMS3 321 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 H7C0C1 242 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 KIR2DS3K7RE56 304 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 KMOO15229 486 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 BUD23O43709 281 aaKnown RBP12.2□□□□□ -0.46
VEGFA-223ENST00000523125 VEGFDO43915 354 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 AGTP01019 485 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 LIPCP11150 499 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 PYGMP11217 842 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 ZNF7P17097 686 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-223ENST00000523125 HLA-DPA1P20036 260 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 ADRA1AP35348 466 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 ATP5OP48047 213 aa12.2□□□□□ -0.46
VEGFA-223ENST00000523125 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
VEGFA-223ENST00000523125 TMEM115Q12893 351 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-223ENST00000523125 NFATC2Q13469 925 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms