RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OR10H2O60403 315 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 MAPK10P53779 464 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 DGCR6Q14129 220 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 DPYSL2Q16555 572 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 CHSY3Q70JA7 882 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 PCDH20Q8N6Y1 951 aaKnown RBP16.09■□□□□ 0.17
USP42-207ENST00000521713 NIPA2Q8N8Q9 360 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 COL26A1Q96A83 441 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 RERGLQ9H628 205 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP42-207ENST00000521713 ZNF624Q9P2J8 865 aaPredicted RBP16.09■□□□□ 0.17
USP42-207ENST00000521713 TCAF1Q9Y4C2 921 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 CDC42P60953 191 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 COPZ1P61923 177 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 CPSF6Q16630 551 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP42-207ENST00000521713 TYSND1Q2T9J0 566 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 HPS1Q92902 700 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 PSMG2Q969U7 264 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 SAMD11Q96NU1 681 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
USP42-207ENST00000521713 ZSCAN32Q9NX65 697 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 COLEC10Q9Y6Z7 277 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 LSM1O15116 133 aaKnown RBP16.08■□□□□ 0.17
USP42-207ENST00000521713 FGFR3P22607 806 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 EDNRBP24530 442 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 PRR23CQ6ZRP0 262 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 ZNF461Q8TAF7 563 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 Q96MT0 163 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 ZNF599Q96NL3 588 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 OSBPL2Q9H1P3 480 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 EPB41L1Q9H4G0 881 aa16.08■□□□□ 0.17
USP42-207ENST00000521713 CCDC59Q9P031 241 aaKnown RBP16.08■□□□□ 0.17
USP42-207ENST00000521713 CCDC162PA2VCL2 907 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 TEAD4Q15561 434 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 MAPKAPK3Q16644 382 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 FNBP1LQ5T0N5 605 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 HECTD2Q5U5R9 776 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 DRICH1Q6PGQ1 229 aaPredicted RBP16.08■□□□□ 0.16
USP42-207ENST00000521713 CACTIN-AS1Q8N1I8 211 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 MINDY2Q8NBR6 621 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 VMP1Q96GC9 406 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 C16orf70Q9BSU1 422 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 SPATA5L1Q9BVQ7 753 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 RPS6KA6Q9UK32 745 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 DHRS12A0PJE2 317 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 BBIP1A8MTZ0 92 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 C2P06681 752 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 OLR1P78380 273 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 PRKG2Q13237 762 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 SIX5Q8N196 739 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 CPT1BQ92523 772 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 DNAJC1Q96KC8 554 aaKnown RBP16.08■□□□□ 0.16
USP42-207ENST00000521713 PWWP2AQ96N64 755 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 AIF1LQ9BQI0 150 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 CORO2BQ9UQ03 480 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 WDR37Q9Y2I8 494 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 FCF1Q9Y324 198 aaKnown RBP16.08■□□□□ 0.16
USP42-207ENST00000521713 GRIN2DO15399 1336 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 PRAMEF1O95521 474 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 BICRALQ6AI39 1079 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 CELF5Q8N6W0 485 aaKnown RBP16.08■□□□□ 0.16
USP42-207ENST00000521713 B3GALT6Q96L58 329 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 BCO2Q9BYV7 579 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 ABCB8Q9NUT2 735 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 GULP1Q9UBP9 304 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 MKL2Q9ULH7 1088 aa16.08■□□□□ 0.16
USP42-207ENST00000521713 SOD2P04179 222 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 CLK3P49761 638 aaKnown RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 BPIFB6Q8NFQ5 453 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 GRPEL2Q8TAA5 225 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 TBATAQ96M53 351 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 OSBPL7Q9BZF2 842 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 SLCO1B3Q9NPD5 702 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 STYXL1Q9Y6J8 313 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 RGS20O76081 388 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 PAICSP22234 425 aaKnown RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 PRKAG1P54619 331 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 GSCP56915 257 aaPredicted RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 FBXO46Q6PJ61 603 aaPredicted RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 CIR1Q86X95 450 aaPredicted RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 ZBTB2Q8N680 514 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 PCDH19Q8TAB3 1148 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 SLC44A1Q8WWI5 657 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 LRRC4CQ9HCJ2 640 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 CHRAC1Q9NRG0 131 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 GMPPBQ9Y5P6 360 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 BTN3A3O00478 584 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 FGF18O76093 207 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 HGFP14210 728 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 HNF4AP41235 474 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 DLG2Q15700 870 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 VITQ6UXI7 678 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 TRIM74Q86UV6 250 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms