RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ARGFXA6NJG6 315 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 OR5K4A6NMS3 321 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 THAP12O43422 761 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SPAG6O75602 509 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GRAP2O75791 330 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 TMEM63AO94886 807 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 IGHEP01854 428 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 C9P02748 559 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PLEKP08567 350 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GOLGA6DP0CG33 693 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 EDN3P14138 238 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 COX6B1P14854 86 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 AK4P27144 223 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PEX19P40855 299 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GNPDA1P46926 289 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FMO5P49326 533 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SULT1E1P49888 294 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 KRT85P78386 507 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 CDK3Q00526 305 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FKBP3Q00688 224 aaKnown RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 DEUP1Q05D60 604 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 LRMPQ12912 555 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 TAF5Q15542 800 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 ZKSCAN8Q15776 578 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SLC25A52Q3SY17 297 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 ATXN7L2Q5T6C5 722 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 IZUMO3Q5VZ72 239 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 AFMIDQ63HM1 303 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 CPZQ66K79 652 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 KCTD16Q68DU8 428 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FCRL6Q6DN72 434 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 CAVIN1Q6NZI2 390 aaKnown RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 MTFR2Q6P444 385 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FAM173BQ6P4H8 233 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 OLFML1Q6UWY5 402 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 IGFL3Q6UXB1 125 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 LIPIQ6XZB0 460 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 BNC2Q6ZN30 1099 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FAM183BPQ6ZVS7 135 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 DPPA4Q7L190 304 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 ENOSF1Q7L5Y1 443 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SLC9B2Q86UD5 537 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 DRC7Q8IY82 874 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GRAMD1CQ8IYS0 662 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 NXPE1Q8N323 547 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 RBMXL3Q8N7X1 1067 aaKnown RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FDCSPQ8NFU4 85 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GPT2Q8TD30 523 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SLC37A2Q8TED4 501 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 CT55Q8WUE5 264 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 WFDC12Q8WWY7 111 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PATE1Q8WXA2 126 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SLC35C1Q96A29 364 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 NUS1Q96E22 293 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 C19orf60Q96EN9 201 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 CCDC34Q96HJ3 373 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 C9orf72Q96LT7 481 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 IP6K3Q96PC2 410 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 OR6C1Q96RD1 312 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 TSG101Q99816 390 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PAIP2Q9BPZ3 127 aaKnown RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 HERPUD2Q9BSE4 406 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 LGR4Q9BXB1 951 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GTPBP4Q9BZE4 634 aaKnown RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GSX2Q9BZM3 304 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SYNCQ9H7C4 482 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 ATP13A3Q9H7F0 1226 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 UCK1Q9HA47 277 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PDE7BQ9NP56 450 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GOLGA6AQ9NYA3 693 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FBXO9Q9UK97 447 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-207ENST00000520168 SLC17A4Q9Y2C5 497 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 KIR2DS5A0A0G2JLQ3 304 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 A0A0G2JNG1 304 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 KIR2DS3K7RE56 304 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 PSMD11O00231 422 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 TEX33O43247 280 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 BUB1O43683 1085 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 KRT86O43790 486 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ZG16O60844 167 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CPNE3O75131 537 aaKnown RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 PIGNO95427 931 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 STSP08842 583 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 RAB40ALP0C0E4 278 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 KRT5P13647 590 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 F3P13726 295 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 DRD2P14416 443 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF28P17035 718 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ITIH2P19823 946 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ACVRL1P37023 503 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ME1P48163 572 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CSNK1DP48730 415 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 VAV2P52735 878 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 GSDMDP57764 484 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 YBEYP58557 167 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 LRRC63Q05C16 580 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 KIR2DS5Q14953 304 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ACOX1Q15067 660 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 SMTNL2Q2TAL5 461 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms