RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZDHHC20Q5W0Z9 365 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 TRIM68Q6AZZ1 485 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 CPNE9Q8IYJ1 553 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 NXPE1Q8N323 547 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 PHTF2Q8N3S3 785 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 RBM15BQ8NDT2 890 aaKnown RBP14.81□□□□□ -0.04
VCAN-211ENST00000513984 CYB5D2Q8WUJ1 264 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 EEF1AKMT1Q8WVE0 214 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 CCDC97Q96F63 343 aaPredicted RBP14.81□□□□□ -0.04
VCAN-211ENST00000513984 LINGO1Q96FE5 620 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 ASIC4Q96FT7 647 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 KLHL32Q96NJ5 620 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 ASB16Q96NS5 453 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 PLEKHG4BQ96PX9 1271 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 BOCQ9BWV1 1114 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 ZNF385DQ9H6B1 395 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 CRLS1Q9UJA2 301 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 TMCO1Q9UM00 188 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 TTC34A8MYJ7 566 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SUPT3HB4E1H0 165 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 STX16-NPEPL1H3BU86 382 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 BTN3A1O00481 513 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 UBFD1O14562 309 aaKnown RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 STX16O14662 325 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SLC22A2O15244 555 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 DCXO43602 365 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SUPT3HO75486 399 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 C1SP09871 688 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 GFAPP14136 432 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 MNAT1P51948 309 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 INHBCP55103 352 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 NAA20P61599 178 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 NAA25Q14CX7 972 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 FAM78AQ5JUQ0 283 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 PTRHD1Q6GMV3 140 aaKnown RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 C12orf40Q86WS4 652 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 ETFBKMTQ8IXQ9 262 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 FBXO39Q8N4B4 442 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 CPSF7Q8N684 471 aaKnown RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 FBXO27Q8NI29 283 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 BPIFB1Q8TDL5 484 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SORCS1Q8WY21 1168 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 C1QTNF3Q9BXJ4 246 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 MEAF6Q9HAF1 191 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 B4GALT6Q9UBX8 382 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 BAIAP2L1Q9UHR4 511 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SLC8A2Q9UPR5 921 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 LAMA3Q16787 3333 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 LRRK1Q38SD2 2015 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 MYO9BQ13459 2157 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 DENND4AQ7Z401 1863 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SIX3O95343 332 aaPredicted RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 RPS17P08708 135 aaKnown RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 ZNF30P17039 623 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 UGT1A6P19224 532 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 UGT1A1P22309 533 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 UGT1A4P22310 534 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 ADSLP30566 484 aaPredicted RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 UGT1A3P35503 534 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 UGT1A5P35504 534 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SEMG2Q02383 582 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 BTKQ06187 659 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 KLF10Q13118 480 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 DNAL1Q4LDG9 190 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 MACC1Q6ZN28 852 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SMARCD2Q92925 531 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 PBXIP1Q96AQ6 731 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 MCUR1Q96AQ8 359 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 CMTM5Q96DZ9 223 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 PPP1R36Q96LQ0 422 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 CDCA3Q99618 268 aaPredicted RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 CIPCQ9C0C6 399 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 SARS2Q9NP81 518 aaKnown RBP14.8□□□□□ -0.04
VCAN-211ENST00000513984 DZANK1Q9NVP4 752 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 PLA2G4CQ9UP65 541 aa14.8□□□□□ -0.04
VCAN-211ENST00000513984 TULP3O75386 442 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 LEFTY1O75610 366 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 NFATC1O95644 943 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 FSHRP23945 695 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 CPOXP36551 454 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 SPINT3P49223 89 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 COPAP53621 1224 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 TXNDC11Q6PKC3 985 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 ARHGAP24Q8N264 748 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 ACTRT2Q8TDY3 377 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 FGF13Q92913 245 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 LRIG1Q96JA1 1093 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 PBX4Q9BYU1 374 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 OBP2AQ9NY56 170 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 TRAF6Q9Y4K3 522 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 PRSS21Q9Y6M0 314 aa14.79□□□□□ -0.04
VCAN-211ENST00000513984 LRRC14BA6NHZ5 514 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 MAGEC1O60732 1142 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 SKAP2O75563 359 aaPredicted RBP14.78□□□□□ -0.04
VCAN-211ENST00000513984 CDK14O94921 469 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 CTSLP07711 333 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 FGF4P08620 206 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms