RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 C9orf16Q9BUW7 83 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 DNAJC11Q9NVH1 559 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 GPSM3Q9Y4H4 160 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 CLOCKO15516 846 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 FAM189A1O60320 539 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 ALPIP09923 528 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 CTSEP14091 401 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 HTRA3P83110 453 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 TCEA2Q15560 299 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 LRRC73Q5JTD7 316 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 ZDHHC13Q8IUH4 622 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 DSELQ8IZU8 1212 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 MAGED4Q96JG8 741 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF395Q9H8N7 513 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 PHPT1Q9NRX4 125 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 LAMB2P55268 1798 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 MAFKO60675 156 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 ASLP04424 464 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 ANPEPP15144 967 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 RRM2P31350 389 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 NAE1Q13564 534 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 CBX2Q14781 532 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 RBM20Q5T481 1227 aaKnown RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 PIK3R6Q5UE93 754 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 EID3Q8N140 333 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 FBXW8Q8N3Y1 598 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 BEND7Q8N7W2 519 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 CNTD1Q8N815 330 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 TRPV1Q8NER1 839 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 POF1BQ8WVV4 589 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 RTP4Q96DX8 246 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 TSSK3Q96PN8 268 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 OR52E6Q96RD3 313 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 HBEGFQ99075 208 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 WDR6Q9NNW5 1121 aaKnown RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 TLR9Q9NR96 1032 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF490Q9ULM2 529 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 GUCY1B2O75343 617 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 RFPL1O75677 317 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 UROSP10746 265 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 CAPN13Q6MZZ7 669 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 AAGABQ6PD74 315 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 ALKAL1Q6UXT8 129 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 CYS1Q717R9 158 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 TMEM135Q86UB9 458 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 FBXO30Q8TB52 745 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 WFIKKN2Q8TEU8 576 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 IMP4Q96G21 291 aaKnown RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 CLPTM1LQ96KA5 538 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 HOPXQ9BPY8 73 aaPredicted RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 CXorf56Q9H5V9 222 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 PCDH12Q9NPG4 1184 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 MOCS1Q9NZB8 636 aa13□□□□□ -0.33
PCDHA4-202ENST00000512229 EIF2B4Q9UI10 523 aaKnown RBP13□□□□□ -0.33
PCDHA4-202ENST00000512229 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 RNASEH2AO75792 299 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 FAM58BPP0C7Q3 252 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 ADRM1Q16186 407 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DHDDSQ86SQ9 333 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 HPS6Q86YV9 775 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 LINC01465Q8N7H1 131 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC24A3Q9HC58 644 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DLX3O60479 287 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 OR4F21O95013 312 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CAPN1P07384 714 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 HNF4AP41235 474 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 PSMD8P48556 350 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CACNA2D1P54289 1103 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 USP46P62068 366 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CFAP206Q8IYR0 622 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 KLHL23Q8NBE8 558 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CXorf40BQ96DE9 158 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 TPD52L3Q96J77 140 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 RAD9AQ99638 391 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 IL12RB2Q99665 862 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 TXLNGYQ9BZA5 131 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 ADPRHL2Q9NX46 363 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 EGFL7Q9UHF1 273 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 PSME2Q9UL46 239 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 POLR3HQ9Y535 204 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 ITM2AO43736 263 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 TOP3BO95985 862 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 IMPDH1P20839 514 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 IL4RP24394 825 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 POU1F1P28069 291 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 MAPK9P45984 424 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CCNHP51946 323 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 BNIP2Q12982 314 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 NRF1Q16656 503 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 SULT1C3Q6IMI6 304 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 GDPD4Q6W3E5 623 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms