RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NDUFS3O75489 264 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PIAS1O75925 651 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SRP72O76094 671 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 FAM107AO95990 144 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 EGFP01133 1207 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PRKCGP05129 697 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PYGLP06737 847 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 CTSLP07711 333 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 ALPIP09923 528 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PIRTP0C851 137 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 TIMP2P16035 220 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 CREB1P16220 341 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 ZNF7P17097 686 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 BPIP17213 487 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 XPAP23025 273 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 NTSR1P30989 418 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 MC4RP32245 332 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 RPA3P35244 121 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SPINT3P49223 89 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 DHPSP49366 369 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 CTBP1Q13363 440 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PEX6Q13608 980 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 BMPR2Q13873 1038 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 MPP2Q14168 576 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 AGERQ15109 404 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SF3A2Q15428 464 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 ARSIQ5FYB1 569 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 WDR45BQ5MNZ6 344 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 LRRC66Q68CR7 880 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 UGT3A1Q6NUS8 523 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SLC23A3Q6PIS1 610 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 UNQ6494/PRO21346Q6UXR6 183 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PARS2Q7L3T8 475 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PTAR1Q7Z6K3 402 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 RBFAQ8N0V3 343 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 OTUD6BQ8N6M0 293 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 ZNF513Q8N8E2 541 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PIP4K2CQ8TBX8 421 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 TCP10LQ8TDR4 215 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SREK1Q8WXA9 508 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 GRAMD1AQ96CP6 724 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 CHMP6Q96FZ7 201 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 FAM129BQ96TA1 746 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 AARSD1Q9BTE6 412 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 ZSCAN5AQ9BUG6 496 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 NSRP1Q9H0G5 558 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 RSPH9Q9H1X1 276 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 CCDC68Q9H2F9 335 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PCDH12Q9NPG4 1184 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 IL26Q9NPH9 171 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 PRSS16Q9NQE7 514 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 TAS2R13Q9NYV9 303 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 IL1RAPL1Q9NZN1 696 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 MARCH4Q9P2E8 410 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 B4GALT6Q9UBX8 382 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SLC39A10Q9ULF5 831 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 SLC6A14Q9UN76 642 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 MTO1Q9Y2Z2 717 aaKnown RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 ACOT9Q9Y305 439 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 VWA7Q9Y334 891 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 NEUROG3Q9Y4Z2 214 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 STON1Q9Y6Q2 735 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 NCOR2Q9Y618 2525 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 DNAH14Q0VDD8 3507 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 CCDC78A2IDD5 438 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GMNCA6NCL1 334 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 K7EQS6 105 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GAPDHSO14556 408 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 PRMT5O14744 637 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GDF9O60383 454 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 PLIN3O60664 434 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 NDUFS2O75306 463 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 HAUS5O94927 633 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 WISP3O95389 354 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 CLDN7O95471 211 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 PRAMEF1O95521 474 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 C2P06681 752 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 EPHX1P07099 455 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GSTM1P09488 218 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 SLC35E2BP0CK96 405 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 CTPS1P17812 591 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 C5AR1P21730 350 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 FDXRP22570 491 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 LHCGRP22888 699 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 OXTRP30559 389 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GKP32189 559 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 IL12RB1P42701 662 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 NUMBP49757 651 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GYS2P54840 703 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 NAA20P61599 178 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 MPP1Q00013 466 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GSTM4Q03013 218 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 PTSQ03393 145 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 ASPHQ12797 758 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 STARD3Q14849 445 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 SUZ12Q15022 739 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms