RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 COPS2P61201 443 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 USP46P62068 366 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MC2RQ01718 297 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 KIF5AQ12840 1032 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 STK4Q13043 487 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MYBPHQ13203 477 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 GAS6Q14393 721 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 NPY5RQ15761 445 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TUBB8Q3ZCM7 444 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 WDR74Q6RFH5 385 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MARK2Q7KZI7 788 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MAMDC2Q7Z304 686 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PASD1Q8IV76 773 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SYTL1Q8IYJ3 562 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 UMODL1-AS1Q8N2C9 162 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 C12orf29Q8N999 325 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TTLQ8NG68 377 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 OR7D4Q8NG98 312 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 FRS2Q8WU20 508 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CCT6BQ92526 530 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 NDRG1Q92597 394 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 QRFPRQ96P65 431 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SLC2A13Q96QE2 648 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MKRN2Q9H000 416 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TNKS2Q9H2K2 1166 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PCDH9Q9HC56 1237 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TIMMDC1Q9NPL8 285 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 C1GALT1Q9NS00 363 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 AHSPQ9NZD4 102 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SLCO3A1Q9UIG8 710 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ACSL6Q9UKU0 697 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ERVK-11Q9UQG0 969 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 RNF215Q9Y6U7 377 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CITO14578 2027 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 GON4LQ3T8J9 2241 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ZNF638Q14966 1978 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 A0A1W2PQF6 199 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 AGPSO00116 658 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ABLIM1O14639 778 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 YY2O15391 372 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TGFB1I1O43294 461 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 KLRC4O43908 158 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SRPX2O60687 465 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ADAM23O75077 832 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 OR2B3O76000 313 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 STK17BO94768 372 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MSL3P1P0C860 447 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SPINK2P20155 84 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 OTX2P32243 289 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ARL1P40616 181 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PRCPP42785 496 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PAFAH1B1P43034 410 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PMS2P54278 862 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PSPHP78330 225 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ABATP80404 500 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CDK18Q07002 472 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 EXT1Q16394 746 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 FAAH2Q6GMR7 532 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 DUS1LQ6P1R4 473 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 DARS2Q6PI48 645 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 UGT2A3Q6UWM9 527 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ISLR2Q6UXK2 745 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 GFRALQ6UXV0 394 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MMS22LQ6ZRQ5 1243 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TMEM26Q6ZUK4 368 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 B4GALNT4Q76KP1 1039 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CHST15Q7LFX5 561 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 LUZP1Q86V48 1076 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PHF13Q86YI8 300 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 MPP5Q8N3R9 675 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 AFAP1L2Q8N4X5 818 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CAMKVQ8NCB2 501 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 OR5L2Q8NGL0 311 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PRR7Q8TB68 274 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CREB3L4Q8TEY5 395 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ATXN7L3BQ96GX2 97 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PLEKHG4BQ96PX9 1271 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 RBM15Q96T37 977 aaKnown RBP eCLIP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 KCNS3Q9BQ31 491 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SLC6A16Q9GZN6 736 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 XYLT2Q9H1B5 865 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 GDPD2Q9HCC8 539 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PCDH12Q9NPG4 1184 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 IMP3Q9NV31 184 aaKnown RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CPNE7Q9UBL6 633 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 AMFRQ9UKV5 643 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ADGRG1Q9Y653 693 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 KIAA1671Q9BY89 1806 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 COL4A4P53420 1690 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-209ENST00000511124 SPAG17Q6Q759 2223 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 CACNA1IQ9P0X4 2223 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 BLACEA4D250 179 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 FAM149AA5PLN7 773 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 ANKUB1A6NFN9 424 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 WASH4PA8MWX3 477 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 TP53I11O14683 189 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 KRT86O43790 486 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 PRAMEF11O60813 436 aa2.81□□□□□ -1.96
CLOCK-209ENST00000511124 UBXN7O94888 489 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms