RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MBD1	Q9UIS9	605 aa	Predicted RBP	13.42	□□□□□ -0.26
APTX-231	ENST00000494973	TRIO	O75962	3097 aa		13.42	□□□□□ -0.26
APTX-231	ENST00000494973	KMT2E	Q8IZD2	1858 aa		13.42	□□□□□ -0.26
APTX-231	ENST00000494973	UBA6	A0AVT1	1052 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-231	ENST00000494973	PRR5-ARHGAP8	B1AHC4	643 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	KPNA5	O15131	536 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	S1PR4	O95977	384 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	SOD1	P00441	154 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	FTH1	P02794	183 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	SNRPA	P09012	282 aa	Known RBP	13.41	□□□□□ -0.26
APTX-231	ENST00000494973	OR56A5	P0C7T3	313 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	HOXD12	P35452	270 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	THOP1	P52888	689 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	RACK1	P63244	317 aa	Known RBP	13.41	□□□□□ -0.26
APTX-231	ENST00000494973	ZNF844	Q08AG5	666 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	INPP5A	Q14642	412 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	CEP85L	Q5SZL2	805 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	CEP68	Q76N32	757 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	ABI3BP	Q7Z7G0	1075 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	ZC3HC1	Q86WB0	502 aa	Known RBP	13.41	□□□□□ -0.26
APTX-231	ENST00000494973	PIANP	Q8IYJ0	282 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	FAM160A2	Q8N612	972 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-231	ENST00000494973	KLK6	Q92876	244 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	COX14	Q96I36	57 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	HSPA12B	Q96MM6	686 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	SMYD2	Q9NRG4	433 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	SENP1	Q9P0U3	644 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	LGALS13	Q9UHV8	139 aa		13.41	□□□□□ -0.26
APTX-231	ENST00000494973	CXorf49	A8MYA2	514 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	MAP2K7	O14733	419 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	RGS16	O15492	202 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A9	O60656	530 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	VPS26A	O75436	327 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	SHBG	P04278	402 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	ITGA2B	P08514	1039 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	SP9	P0CG40	484 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	ATP1B2	P14415	290 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	PKM	P14618	531 aa	Known RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	GNS	P15586	552 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A6	P19224	532 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	CD9	P21926	228 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A1	P22309	533 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A4	P22310	534 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A3	P35503	534 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A5	P35504	534 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	SERPINB8	P50452	374 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	PFN3	P60673	137 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	MPP1	Q00013	466 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	POU4F1	Q01851	419 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	DMWD	Q09019	674 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	NFATC4	Q14934	902 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	TEAD4	Q15561	434 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	LYSMD4	Q5XG99	296 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	PMS2CL	Q68D20	193 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	PTRHD1	Q6GMV3	140 aa	Known RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	MACC1	Q6ZN28	852 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	MFSD2A	Q8NA29	543 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	ZBTB44	Q8NCP5	570 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	DCAKD	Q8WVC6	231 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	DNASE2B	Q8WZ79	361 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	KCNJ9	Q92806	393 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	ZC3H10	Q96K80	434 aa	Known RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	CABS1	Q96KC9	395 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	GPR22	Q99680	433 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	APOO	Q9BUR5	198 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	IRF2BPL	Q9H1B7	796 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	FAM96A	Q9H5X1	160 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A7	Q9HAW7	530 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A10	Q9HAW8	530 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	UGT1A8	Q9HAW9	530 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	POPDC3	Q9HBV1	291 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	MBNL1	Q9NR56	388 aa	Known RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-231	ENST00000494973	AASDHPPT	Q9NRN7	309 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	GPR34	Q9UPC5	381 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	NFS1	Q9Y697	457 aa		13.4	□□□□□ -0.26
APTX-231	ENST00000494973	EML5	Q05BV3	1969 aa		13.4	□□□□□ -0.27
APTX-231	ENST00000494973	FAM95C	A0A1B0GW59	222 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TLDC2	A0PJX2	215 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973		E5RI56	91 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973		K7ESM1	405 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TNFRSF10C	O14798	259 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	RAD51B	O15315	384 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	INPP4B	O15327	924 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	KCNJ13	O60928	360 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	CDK14	O94921	469 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	ASMTL	O95671	621 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	AHSG	P02765	367 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	VCL	P18206	1134 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	KRT15	P19012	456 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	BCKDHB	P21953	392 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	SKIV2L2	P42285	1042 aa	Known RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TMEM115	Q12893	351 aa	Predicted RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	SEMA3A	Q14563	771 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TMED2	Q15363	201 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	SMAD1	Q15797	465 aa	Known RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TTLL9	Q3SXZ7	439 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	BCL7A	Q4VC05	210 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TAF1B	Q53T94	588 aa	Predicted RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms