RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SLC19A1P41440 591 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 FASLGP48023 281 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 SEPHS1P49903 392 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 CTSCP53634 463 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 UCNP55089 124 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 EIF3IQ13347 325 aaKnown RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 PRKD1Q15139 912 aaPredicted RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 ATP13A5Q4VNC0 1218 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 SIRPB2Q5JXA9 342 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 DUS1LQ6P1R4 473 aaKnown RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 KDELC1Q6UW63 502 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 SPOCD1Q6ZMY3 1216 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 PRICKLE2Q7Z3G6 844 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 TMC3Q7Z5M5 1100 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 NT5DC3Q86UY8 548 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 PTRH1Q86Y79 214 aaKnown RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 CCDC50Q8IVM0 306 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 MAP7D3Q8IWC1 876 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 ZNF567Q8N184 647 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 TTC30BQ8N4P2 665 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 BEND7Q8N7W2 519 aaPredicted RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 TC2NQ8N9U0 490 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 OR4D9Q8NGE8 314 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 GPR150Q8NGU9 434 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 RSC1A1Q92681 617 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 GRAMD1AQ96CP6 724 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 SGF29Q96ES7 293 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 CCDC42Q96M95 316 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 GPR63Q9BZJ6 419 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 PKD2L2Q9NZM6 624 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 IL17BQ9UHF5 180 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 PSMD13Q9UNM6 376 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 ALG6Q9Y672 507 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 CFAP20Q9Y6A4 193 aaKnown RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 TENM4Q6N022 2769 aa8.79□□□□□ -1
HDAC3-211ENST00000491581 TNRC6AQ8NDV7 1962 aaKnown RBP8.79□□□□□ -1
HDAC3-211ENST00000491581 FASNP49327 2511 aaKnown RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 SOWAHDA6NJG2 315 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 B8ZZF3 427 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 GAPDHSO14556 408 aaPredicted RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 SPOPO43791 374 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 SLC28A2O43868 658 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 MTA2O94776 668 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TIAF1O95411 115 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 AGTP01019 485 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 PRSS56P0CW18 603 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 F3P13726 295 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 NR1D1P20393 614 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 MX2P20592 715 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 WNT3AP56704 352 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 CDK18Q07002 472 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 CHRNA6Q15825 494 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TAZQ16635 292 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 INSCQ1MX18 579 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TEX44Q53QW1 395 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 ZNF569Q5MCW4 686 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TMEM71Q6P5X7 295 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 FBXO38Q6PIJ6 1188 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 XKR5Q6UX68 686 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 FAM151BQ6UXP7 276 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 DET1Q7L5Y6 550 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 C11orf96Q7Z7L8 435 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TMEM135Q86UB9 458 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 LRRC49Q8IUZ0 686 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 NDUFAF2Q8N183 169 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TAB3Q8N5C8 712 aaPredicted RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 LILRA3Q8N6C8 439 aaPredicted RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 IPMKQ8NFU5 416 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 FATE1Q969F0 183 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 GLYATL1Q969I3 302 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 RTP4Q96DX8 246 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 MED8Q96G25 268 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 AHCYL2Q96HN2 611 aaKnown RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 MRGPRX2Q96LB1 330 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TEKT5Q96M29 485 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 PPM1MQ96MI6 270 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TGM7Q96PF1 710 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 TAAR9Q96RI9 348 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 RUFY1Q96T51 708 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 SLC12A9Q9BXP2 914 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 MAK16Q9BXY0 300 aaKnown RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 SLC25A51Q9H1U9 297 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 FAM96AQ9H5X1 160 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 AKIRIN1Q9H9L7 192 aaPredicted RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 VPS18Q9P253 973 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 CPNE7Q9UBL6 633 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 ACSL6Q9UKU0 697 aa8.78□□□□□ -1
HDAC3-211ENST00000491581 REXO2Q9Y3B8 237 aaKnown RBP8.78□□□□□ -1
HDAC3-211ENST00000491581 PCSK5Q92824 1860 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 hCG_1818297A0A087WSY0 165 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 A0A0A6YYK5 440 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-211ENST00000491581 PRR19A6NJB7 356 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 OR2AG2A6NM03 316 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 PDZK1P1A8MUH7 402 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 AKR1B15C9JRZ8 316 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-211ENST00000491581 K7EM74 188 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 RAD1O60671 282 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 FURINP09958 794 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 RBL1P28749 1068 aa8.77□□□□□ -1.01
HDAC3-211ENST00000491581 CSTF2P33240 577 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms