RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 PTPRCAPQ14761 206 aa13□□□□□ -0.33
SHC1-211ENST00000490667 NR1D2Q14995 579 aa13□□□□□ -0.33
SHC1-211ENST00000490667 RPS6KA1Q15418 735 aa13□□□□□ -0.33
SHC1-211ENST00000490667 TAF1AQ15573 450 aaPredicted RBP13□□□□□ -0.33
SHC1-211ENST00000490667 COL28A1Q2UY09 1125 aa13□□□□□ -0.33
SHC1-211ENST00000490667 SEL1L2Q5TEA6 688 aa13□□□□□ -0.33
SHC1-211ENST00000490667 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
SHC1-211ENST00000490667 ARHGEF18Q6ZSZ5 1173 aa13□□□□□ -0.33
SHC1-211ENST00000490667 RAB11FIP2Q7L804 512 aa13□□□□□ -0.33
SHC1-211ENST00000490667 PIM3Q86V86 326 aa13□□□□□ -0.33
SHC1-211ENST00000490667 SFRP1Q8N474 314 aa13□□□□□ -0.33
SHC1-211ENST00000490667 FBXO39Q8N4B4 442 aa13□□□□□ -0.33
SHC1-211ENST00000490667 SLC35B2Q8TB61 432 aa13□□□□□ -0.33
SHC1-211ENST00000490667 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
SHC1-211ENST00000490667 SLC37A2Q8TED4 501 aa13□□□□□ -0.33
SHC1-211ENST00000490667 TTC25Q96NG3 672 aa13□□□□□ -0.33
SHC1-211ENST00000490667 TBL1YQ9BQ87 522 aa13□□□□□ -0.33
SHC1-211ENST00000490667 ASCL3Q9NQ33 180 aa13□□□□□ -0.33
SHC1-211ENST00000490667 THSD1Q9NS62 852 aa13□□□□□ -0.33
SHC1-211ENST00000490667 KLC4Q9NSK0 619 aa13□□□□□ -0.33
SHC1-211ENST00000490667 SLC23A2Q9UGH3 650 aa13□□□□□ -0.33
SHC1-211ENST00000490667 ARL5AQ9Y689 179 aa13□□□□□ -0.33
SHC1-211ENST00000490667 FREM2Q5SZK8 3169 aa13□□□□□ -0.33
SHC1-211ENST00000490667 ZZEF1O43149 2961 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 PLD2O14939 933 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 TNFSF15O95150 251 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 METTL18O95568 372 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 ZNF7P17097 686 aaPredicted RBP12.99□□□□□ -0.33
SHC1-211ENST00000490667 ITPKBP27987 946 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 FASLGP48023 281 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
SHC1-211ENST00000490667 MSLNQ13421 630 aaPredicted RBP12.99□□□□□ -0.33
SHC1-211ENST00000490667 SQSTM1Q13501 440 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 GTF2H3Q13889 308 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 CLPPQ16740 277 aaPredicted RBP12.99□□□□□ -0.33
SHC1-211ENST00000490667 KHDC1Q4VXA5 237 aaKnown RBP12.99□□□□□ -0.33
SHC1-211ENST00000490667 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 NKAIN2Q5VXU1 208 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 DENND5AQ6IQ26 1287 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 FAM151BQ6UXP7 276 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 ZNF662Q6ZS27 426 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 TMPRSS9Q7Z410 1059 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 LRRTM4Q86VH4 590 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 KLHDC8BQ8IXV7 354 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 ZNF398Q8TD17 642 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 LRRC45Q96CN5 670 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 TMEM121Q9BTD3 319 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 RDH14Q9HBH5 336 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 ARNT2Q9HBZ2 717 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 PRDM8Q9NQV8 689 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 KCNK4Q9NYG8 393 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 RALYQ9UKM9 306 aaKnown RBP12.99□□□□□ -0.33
SHC1-211ENST00000490667 KCTD3Q9Y597 815 aa12.99□□□□□ -0.33
SHC1-211ENST00000490667 GOLGA4Q13439 2230 aaKnown RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 IGHV1OR21-1A0A087WYE8 117 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 KIR2DS5A0A0G2JLQ3 304 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 A0A0G2JNG1 304 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 A6NCN8 305 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 OR5K4A6NMS3 321 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 KIR2DS3K7RE56 304 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 CRTAMO95727 393 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 F3P13726 295 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 SLC2A4P14672 509 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 STIP1P31948 543 aaKnown RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 CA5AP35218 305 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 ABCG1P45844 678 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 GDF10P55107 478 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 PCBP4P57723 403 aaKnown RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 KIR2DS5Q14953 304 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 INSCQ1MX18 579 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 LDLRAP1Q5SW96 308 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 KCTD11Q693B1 232 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 ZNF574Q6ZN55 896 aaPredicted RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 SLC13A5Q86YT5 568 aaPredicted RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 ZNF547Q8IVP9 402 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 SLITRK4Q8IW52 837 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 OR4K2Q8NGD2 314 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 SH3KBP1Q96B97 665 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 ALS2CR12Q96Q35 445 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 FRMD8P1Q9BZ68 369 aaPredicted RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 OSGEPL1Q9H4B0 414 aa12.98□□□□□ -0.33
SHC1-211ENST00000490667 STN1Q9H668 368 aaKnown RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 SARS2Q9NP81 518 aaKnown RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 FEZ2Q9UHY8 353 aaPredicted RBP12.98□□□□□ -0.33
SHC1-211ENST00000490667 DNAJC16Q9Y2G8 782 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms