RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ADRA1AP35348 466 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A5P35504 534 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 GPR3P46089 330 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 EIF3IQ13347 325 aaKnown RBP24.69■■□□□ 1.54
HMGN1-217ENST00000489072 BIRC2Q13490 618 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 MAP9Q49MG5 647 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 USP53Q70EK8 1073 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 GLT6D1Q7Z4J2 308 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 FBXO39Q8N4B4 442 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 CCDC110Q8TBZ0 833 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 HES6Q96HZ4 224 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 SPATA13Q96N96 652 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 VPS35Q96QK1 796 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 FERMT1Q9BQL6 677 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 ZNF106Q9H2Y7 1883 aaKnown RBP24.68■■□□□ 1.54
HMGN1-217ENST00000489072 AGRPO00253 132 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 FASLGP48023 281 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 TLE3Q04726 772 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 KLF1Q13351 362 aaPredicted RBP24.68■■□□□ 1.54
HMGN1-217ENST00000489072 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.68■■□□□ 1.54
HMGN1-217ENST00000489072 NKAIN2Q5VXU1 208 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 CRTC3Q6UUV7 619 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 RANBP10Q6VN20 620 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 ZNF574Q6ZN55 896 aaPredicted RBP24.68■■□□□ 1.54
HMGN1-217ENST00000489072 CLEC14AQ86T13 490 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 PIM3Q86V86 326 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 ZNF761Q86XN6 746 aaPredicted RBP24.68■■□□□ 1.54
HMGN1-217ENST00000489072 APOL2Q9BQE5 337 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 SLC23A2Q9UGH3 650 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 R3HDM2Q9Y2K5 976 aaKnown RBP24.68■■□□□ 1.54
HMGN1-217ENST00000489072 LOXL2Q9Y4K0 774 aa24.68■■□□□ 1.54
HMGN1-217ENST00000489072 IGHV1OR21-1A0A087WYE8 117 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 TCRBV7S2A1N4TA0A589 114 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 GPR89AB7ZAQ6 455 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 GAPDHSO14556 408 aaPredicted RBP24.67■■□□□ 1.54
HMGN1-217ENST00000489072 GPR39O43194 453 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 SNX2O60749 519 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 STK10O94804 968 aaKnown RBP24.67■■□□□ 1.54
HMGN1-217ENST00000489072 ITGA2BP08514 1039 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 GPR89BP0CG08 455 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 CA5AP35218 305 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 SPAM1P38567 509 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 MLLT3P42568 568 aaPredicted RBP24.67■■□□□ 1.54
HMGN1-217ENST00000489072 PTPRCAPQ14761 206 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 PLA2G4EQ3MJ16 856 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 IYDQ6PHW0 289 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 ZNF547Q8IVP9 402 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 KLC4Q9NSK0 619 aa24.67■■□□□ 1.54
HMGN1-217ENST00000489072 GOLGA6L6A8MZA4 724 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 VEGFDO43915 354 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 CSF2RBP32927 897 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 CLCNKAP51800 687 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 GSDMDP57764 484 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 CFHR1Q03591 330 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 CHRNA6Q15825 494 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 PHF19Q5T6S3 580 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 FAM151BQ6UXP7 276 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 RNF10Q8N5U6 811 aaKnown RBP24.66■■□□□ 1.54
HMGN1-217ENST00000489072 DTX3LQ8TDB6 740 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 KCNE4Q8WWG9 221 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 PRORYQ9H606 182 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 PRDM8Q9NQV8 689 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 KCNK4Q9NYG8 393 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 PISDQ9UG56 409 aa24.66■■□□□ 1.54
HMGN1-217ENST00000489072 ZW10O43264 779 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A9O60656 530 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 CDK14O94921 469 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 F3P13726 295 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 HOXB3P14651 431 aaPredicted RBP24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A6P19224 532 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 ITIH1P19827 911 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A1P22309 533 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A4P22310 534 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A3P35503 534 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 SQSTM1Q13501 440 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 C16orf72Q14CZ0 275 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 CLPPQ16740 277 aaPredicted RBP24.65■■□□□ 1.54
HMGN1-217ENST00000489072 ZDHHC20Q5W0Z9 365 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 LRRTM4Q86VH4 590 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 TTC13Q8NBP0 860 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A7Q9HAW7 530 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A10Q9HAW8 530 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 UGT1A8Q9HAW9 530 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 SARS2Q9NP81 518 aaKnown RBP24.65■■□□□ 1.54
HMGN1-217ENST00000489072 AAR2Q9Y312 384 aaKnown RBP24.65■■□□□ 1.54
HMGN1-217ENST00000489072 ARL5AQ9Y689 179 aa24.65■■□□□ 1.54
HMGN1-217ENST00000489072 IGHV5-10-1A0A0J9YXX1 117 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 GOLGA6L9A6NEM1 432 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 C5orf60A6NFR6 353 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 PRR19A6NJB7 356 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 KMOO15229 486 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 PTMAP06454 111 aaKnown RBP24.64■■□□□ 1.54
HMGN1-217ENST00000489072 ZNF7P17097 686 aaPredicted RBP24.64■■□□□ 1.54
HMGN1-217ENST00000489072 ETV5P41161 510 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 HHEXQ03014 270 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 MSLNQ13421 630 aaPredicted RBP24.64■■□□□ 1.54
HMGN1-217ENST00000489072 PRPSAP1Q14558 356 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 INSCQ1MX18 579 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 KLHDC8BQ8IXV7 354 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 FAM71DQ8N9W8 422 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms