RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TAB3Q8N5C8 712 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 Q8N9G6 341 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 GLIS1Q8NBF1 620 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 OR4K2Q8NGD2 314 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 GRAMD1AQ96CP6 724 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 NXPE2Q96DL1 559 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 C19orf43Q9BQ61 176 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 LRRC40Q9H9A6 602 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 ETNK1Q9HBU6 452 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 SMOXQ9NWM0 555 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 ZNF148Q9UQR1 794 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 KCNK6Q9Y257 313 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 PSMD3O43242 534 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 CDK14O94921 469 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 FGGP02679 453 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 ETS1P14921 441 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 TPH1P17752 444 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 CXCR5P32302 372 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 SPIDRQ14159 915 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 IYDQ6PHW0 289 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 TMPRSS9Q7Z410 1059 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 B3GNT8Q7Z7M8 397 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 DDHD1Q8NEL9 900 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 OR13C4Q8NGS5 318 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 ZNF398Q8TD17 642 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 SLC37A2Q8TED4 501 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 ATXN7L3BQ96GX2 97 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 FKBPLQ9UIM3 349 aa15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 DRG1Q9Y295 367 aaKnown RBP15.74■□□□□ 0.11
CTDSP1-209ENST00000488627 CACNA1BQ00975 2339 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 TRBV23OR9-2A0A075B6M9 112 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 AGAP14A8MT82 685 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 D6RAR5 112 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 KMOO15229 486 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 CEP104O60308 925 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 CRTAMO95727 393 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 IFNB1P01574 187 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 MPOP05164 745 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ZSCAN5DPP0CG00 497 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ZNF7P17097 686 aaPredicted RBP15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 PSMA3P25788 255 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 FASLGP48023 281 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 LSSP48449 732 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 OR1D5P58170 312 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ZFP36L1Q07352 338 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 GPRC6AQ5T6X5 926 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 CRTC3Q6UUV7 619 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 LRRTM4Q86VH4 590 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 RASGEF1AQ8N9B8 481 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 PRR11Q96HE9 360 aaPredicted RBP15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 GFM1Q96RP9 751 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 PRDM8Q9NQV8 689 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 KLC4Q9NSK0 619 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ATXN7L1Q9ULK2 861 aaPredicted RBP15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 RAXQ9Y2V3 346 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 JRKLQ9Y4A0 524 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 AK5Q9Y6K8 562 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 CELSR3Q9NYQ7 3312 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ZZEF1O43149 2961 aa15.73■□□□□ 0.11
CTDSP1-209ENST00000488627 ARHGEF17Q96PE2 2063 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 PMS2P1A4D2B8 440 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 ERI2A8K979 691 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 RHPN2P1A8MT19 583 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 BRINP1O60477 761 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 SRP72O76094 671 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 DXOO77932 396 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 SUN1O94901 812 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 PRAMEF1O95521 474 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 CD1CP29017 333 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 ALDH4A1P30038 563 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 RPL22P35268 128 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 FDFT1P37268 417 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 GPR3P46089 330 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 CTSCP53634 463 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 PDE1BQ01064 536 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 SQSTM1Q13501 440 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 SEMA5AQ13591 1074 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 ITGA9Q13797 1035 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 LDLRAP1Q5SW96 308 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 MICALCLQ6ZW33 695 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 RASGEF1CQ8N431 466 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 PRELID2Q8N945 189 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 GDAP1Q8TB36 358 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 TIMM29Q9BSF4 260 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 SYNDIG1Q9H7V2 258 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 POLR1BQ9H9Y6 1135 aa15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 PIH1D1Q9NWS0 290 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 SCHIP1Q9P0W5 487 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 KMT2BQ9UMN6 2715 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-209ENST00000488627 COL27A1Q8IZC6 1860 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 ACACAQ13085 2346 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 MROH6A6NGR9 719 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 TLX3O43711 291 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 KRT37O76014 449 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 F3P13726 295 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 GRIA1P42261 906 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 KCNJ1P48048 391 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms