RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PEX13Q92968 403 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 CIB1Q99828 191 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 TEX12Q9BXU0 123 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 IRAK4Q9NWZ3 460 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 A0A0D9SEW6 157 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 A0A1W2PQ67 120 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 KDM1AO60341 852 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ALOX15P16050 662 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 XRCC1P18887 633 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 TLE2Q04725 743 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 RANBP10Q6VN20 620 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF534Q76KX8 674 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 GPR180Q86V85 440 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ADHFE1Q8IWW8 467 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 OR9Q1Q8NGQ5 310 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 PPM1MQ96MI6 270 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 HBEGFQ99075 208 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 MAGEL2Q9UJ55 1249 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 SSC5DA1L4H1 1573 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 DPPA5A6NC42 116 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 F8W810 466 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 KDELR3O43731 214 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 T-ENOLP0DO92 83 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 NR1H2P55055 460 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 IL23RQ5VWK5 629 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 CCDC81Q6ZN84 652 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 TMEM26Q6ZUK4 368 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 CHST9Q7L1S5 443 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 SPPL2CQ8IUH8 684 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 SCML4Q8N228 414 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 RPL10LQ96L21 214 aaKnown RBP11.71□□□□□ -0.53
TRA2B-214ENST00000487615 MAGEB10Q96LZ2 347 aaPredicted RBP11.71□□□□□ -0.53
TRA2B-214ENST00000487615 OR52E6Q96RD3 313 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 ABCG8Q9H221 673 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 BRD9Q9H8M2 597 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 TBC1D23Q9NUY8 699 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 M0R3G1 203 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 HS6ST1O60243 411 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 PGGT1BP53609 377 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 AQP4P55087 323 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 GTF2H2Q13888 395 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 PTPRCAPQ14761 206 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 GTF2H2CQ6P1K8 395 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 CEP97Q8IW35 865 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 COLGALT2Q8IYK4 626 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 TBC1D21Q8IYX1 336 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF570Q96NI8 536 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 PSKH2Q96QS6 385 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 OSBPL6Q9BZF3 934 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 ELAC1Q9H777 363 aaKnown RBP11.71□□□□□ -0.53
TRA2B-214ENST00000487615 PNPLA3Q9NST1 481 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 IMPAD1Q9NX62 359 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
TRA2B-214ENST00000487615 AHSPQ9NZD4 102 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF490Q9ULM2 529 aaPredicted RBP11.71□□□□□ -0.53
TRA2B-214ENST00000487615 RAB26Q9ULW5 256 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
TRA2B-214ENST00000487615 ECI2O75521 394 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 PCDH8O95206 1070 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 ABCB1P08183 1280 aaPredicted RBP11.71□□□□□ -0.54
TRA2B-214ENST00000487615 CNPP09543 421 aaKnown RBP11.71□□□□□ -0.54
TRA2B-214ENST00000487615 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 GSTT1P30711 240 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 CNTN1Q12860 1018 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 EPS8Q12929 822 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.54
TRA2B-214ENST00000487615 PROSER1Q86XN7 944 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 TIFAQ96CG3 184 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 CYP2S1Q96SQ9 504 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 KATNBL1Q9H079 304 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 MUC13Q9H3R2 512 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 AKTIPQ9H8T0 292 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 THG1LQ9NWX6 298 aaKnown RBP11.71□□□□□ -0.54
TRA2B-214ENST00000487615 RNF186Q9NXI6 227 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.54
TRA2B-214ENST00000487615 IFNA14P01570 189 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 C8AP07357 584 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ANXA6P08133 673 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 RPIAP49247 311 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 IL5RAQ01344 420 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 CSTF3Q12996 717 aaKnown RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ADGRE1Q14246 886 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 TECRLQ5HYJ1 363 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 C11orf96Q7Z7L8 435 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 SLC44A2Q8IWA5 706 aaPredicted RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 TERB1Q8NA31 727 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ASZ1Q8WWH4 475 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 NT5C3BQ969T7 300 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 RANBP9Q96S59 729 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 MRPS26Q9BYN8 205 aaKnown RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms