RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 CBLBQ13191 982 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 KHDC1Q4VXA5 237 aaKnown RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ZRANB3Q5FWF4 1079 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PRAMEF14Q5SWL7 426 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SLC23A3Q6PIS1 610 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 UNC5AQ6ZN44 842 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SNX20Q7Z614 316 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 GSPT2Q8IYD1 628 aaKnown RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 DCLK2Q8N568 766 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 NAT14Q8WUY8 206 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 BTN2A2Q8WVV5 523 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 GLYATL1Q969I3 302 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 LRRC39Q96DD0 335 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CCDC97Q96F63 343 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CFAP36Q96G28 342 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 COX14Q96I36 57 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 HIC2Q96JB3 615 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CAPN10Q9HC96 672 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PHPT1Q9NRX4 125 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ZC3H7BQ9UGR2 993 aaKnown RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 GMEB2Q9UKD1 530 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ANKRD6Q9Y2G4 727 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 TMEM98Q9Y2Y6 226 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SLC30A1Q9Y6M5 507 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 FAM186AA6NE01 2351 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PCDH15Q96QU1 1955 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SPTY2D1-AS1A0A0U1RR47 76 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 AGAP14A8MT82 685 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 EIF3HO15372 352 aaKnown RBP eCLIP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SLC25A14O95258 325 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 FUCA1P04066 466 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PYGLP06737 847 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 POLBP06746 335 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 MYCLP1P12525 358 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ITGALP20701 1170 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 DPP6P42658 865 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 POLD2P49005 469 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 C21orf59P57076 290 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 NXPH1P58417 271 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 KIAA1024LP59773 190 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 YPEL5P62699 121 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 OVGP1Q12889 678 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CUL1Q13616 776 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ITGA9Q13797 1035 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 FZD2Q14332 565 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CRYMQ14894 314 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 NFATC4Q14934 902 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 TEAD4Q15561 434 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ZNF542PQ5EBM4 170 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PDPK2PQ6A1A2 396 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 KIAA0930Q6ICG6 404 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 DOK6Q6PKX4 331 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 AFTPHQ6ULP2 937 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ENPP7Q6UWV6 458 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CAPN12Q6ZSI9 719 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 ASCL5Q7RTU5 278 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 LDB1Q86U70 411 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 OR4L1Q8NH43 312 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 CEP76Q8TAP6 659 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PYROXD1Q8WU10 500 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 UBXN4Q92575 508 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 C9orf72Q96LT7 481 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 FMO2Q99518 471 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 MRPL40Q9NQ50 206 aaKnown RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 MARCH4Q9P2E8 410 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 PCYT1BQ9Y5K3 369 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-206ENST00000478048 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
CBWD3-206ENST00000478048 LRP4O75096 1905 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 PIKFYVEQ9Y2I7 2098 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 TRBV5-4A0A0C4DH59 114 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 FAM181BA6NEQ2 426 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 CACNB4O00305 520 aaPredicted RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 TOR1BO14657 336 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 SCAMP1O15126 338 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 F7P08709 466 aaPredicted RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 HOXC4P09017 264 aaPredicted RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 FAM153BP0C7A2 387 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 CTSKP43235 329 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 MAGEA4P43358 317 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 THOP1P52888 689 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 CACNG1Q06432 222 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 GRIK2Q13002 908 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 EIF2B5Q13144 721 aaKnown RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 SF3A2Q15428 464 aaKnown RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 FAM153CQ494X1 144 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 UBAP2Q5T6F2 1119 aaKnown RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 GPRC6AQ5T6X5 926 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 ARMC3Q5W041 872 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 TRMT10BQ6PF06 316 aaKnown RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 TAS2R42Q7RTR8 314 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 OR2I1PQ8NGU4 316 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 GDAP1Q8TB36 358 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 TSACCQ96A04 125 aaPredicted RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 PDXPQ96GD0 296 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms