RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 FOXJ2Q9P0K8 574 aa10.67□□□□□ -0.7
SEC13-214ENST00000476597 SLC23A2Q9UGH3 650 aa10.67□□□□□ -0.7
SEC13-214ENST00000476597 TMPRSS11EQ9UL52 423 aa10.67□□□□□ -0.7
SEC13-214ENST00000476597 PCDHA3Q9Y5H8 950 aa10.67□□□□□ -0.7
SEC13-214ENST00000476597 UNC13CQ8NB66 2214 aa10.67□□□□□ -0.7
SEC13-214ENST00000476597 KIR2DS5A0A0G2JLQ3 304 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 A0A0G2JNG1 304 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 SOWAHDA6NJG2 315 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 OR5K4A6NMS3 321 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 BTNL10A8MVZ5 291 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 KIR2DS3K7RE56 304 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 VEGFDO43915 354 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 SNX2O60749 519 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 APOC2P02655 101 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 PRB1P04280 392 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 THRAP10827 490 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 LIPCP11150 499 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 FGF3P11487 239 aaPredicted RBP10.66□□□□□ -0.7
SEC13-214ENST00000476597 F3P13726 295 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 SLC2A4P14672 509 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 MPSTP25325 297 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 CD82P27701 267 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 CSF2RBP32927 897 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 COPS2P61201 443 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 HHEXQ03014 270 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 NFATC2Q13469 925 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 KIR2DS5Q14953 304 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 SIRPB2Q5JXA9 342 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 TMEM164Q5U3C3 297 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 SLC9B2Q86UD5 537 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 ZFAND4Q86XD8 727 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 ZNF761Q86XN6 746 aaPredicted RBP10.66□□□□□ -0.7
SEC13-214ENST00000476597 DTX1Q86Y01 620 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 PHYKPLQ8IUZ5 450 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 CCDC50Q8IVM0 306 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 TTC30BQ8N4P2 665 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 AGBL5Q8NDL9 886 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 OR10G6Q8NH81 332 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 TTC9Q92623 222 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 HAUS1Q96CS2 278 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 AHCYL2Q96HN2 611 aaKnown RBP10.66□□□□□ -0.7
SEC13-214ENST00000476597 OXNAD1Q96HP4 312 aaPredicted RBP10.66□□□□□ -0.7
SEC13-214ENST00000476597 QKIQ96PU8 341 aaKnown RBP eCLIP10.66□□□□□ -0.7
SEC13-214ENST00000476597 PLEKHG4BQ96PX9 1271 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 VPS35Q96QK1 796 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 TAAR9Q96RI9 348 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 HEMGNQ9BXL5 484 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 BPIFA1Q9NP55 256 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 PRDM8Q9NQV8 689 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 TMEM9Q9P0T7 183 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 KLHL8Q9P2G9 620 aaPredicted RBP10.66□□□□□ -0.7
SEC13-214ENST00000476597 TRHDEQ9UKU6 1024 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 EFR3BQ9Y2G0 817 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 PCDHGA3Q9Y5H0 932 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 DUSP10Q9Y6W6 482 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 SHROOM3Q8TF72 1996 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
SEC13-214ENST00000476597 ARHGEF17Q96PE2 2063 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 PRR19A6NJB7 356 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 KMOO15229 486 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 DUX1O43812 170 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 C1QL1O75973 258 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 CDK14O94921 469 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 SLC4A1P02730 911 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 ZNF7P17097 686 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 XRCC1P18887 633 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 RBL1P28749 1068 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 CSTF2P33240 577 aaKnown RBP eCLIP10.65□□□□□ -0.76e-12■■■□□ 17.9
SEC13-214ENST00000476597 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 CHRNA4P43681 627 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 ARSDP51689 593 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 EPHA4P54764 986 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 UBE2IP63279 158 aaKnown RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 C19orf57Q0VDD7 668 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 TMEM115Q12893 351 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 MPP3Q13368 585 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 NOMO1Q15155 1222 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 SLC1A5Q15758 541 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 ATP13A5Q4VNC0 1218 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 KHDC1Q4VXA5 237 aaKnown RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 TAF1BQ53T94 588 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 ZDHHC20Q5W0Z9 365 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 WDR74Q6RFH5 385 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 RAD9BQ6WBX8 426 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 ARHGAP22Q7Z5H3 698 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 ZNF547Q8IVP9 402 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 SLC25A41Q8N5S1 370 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 STN1Q9H668 368 aaKnown RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 C10orf88Q9H8K7 445 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 IL26Q9NPH9 171 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 OCIAD1Q9NX40 245 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.65□□□□□ -0.7
SEC13-214ENST00000476597 HACD3Q9P035 362 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 IL17CQ9P0M4 197 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 SCHIP1Q9P0W5 487 aaPredicted RBP10.65□□□□□ -0.7
SEC13-214ENST00000476597 CPNE7Q9UBL6 633 aa10.65□□□□□ -0.7
SEC13-214ENST00000476597 REXO2Q9Y3B8 237 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms