RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 H7C0S8 307 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ARHGAP33O14559 1287 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 FPGTO14772 594 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 STX7O15400 261 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CFIP05156 583 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CEACAM5P06731 702 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 HOXC4P09017 264 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CTAGE8P0CG41 777 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MLNP12872 115 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 GNSP15586 552 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ADRA1DP25100 572 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 NFKBIAP25963 317 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ECHS1P30084 290 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ARCN1P48444 511 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 POLD2P49005 469 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 NPY2RP49146 381 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 LMAN1P49257 510 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ATXN3P54252 364 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 DRG2P55039 364 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TMPRSS15P98073 1019 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 B4GALNT1Q00973 533 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 OVGP1Q12889 678 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SEPT6Q14141 434 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 LY6DQ14210 128 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SEMA3AQ14563 771 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 FASTKD3Q14CZ7 662 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MORF4L2Q15014 288 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ALG11Q2TAA5 492 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 HLA-BQ31612 363 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ZNF542PQ5EBM4 170 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TSTD2Q5T7W7 516 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 FAM151BQ6UXP7 276 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TMPRSS7Q7RTY8 843 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 KANSL1Q7Z3B3 1105 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 GPR155Q7Z3F1 870 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MAATS1Q7Z4T9 603 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 PTAR1Q7Z6K3 402 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CTAGE6Q86UF2 777 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CTAGE4Q8IX94 777 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 DNAAF3Q8N9W5 541 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MNS1Q8NEH6 495 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CEP76Q8TAP6 659 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CCHCR1Q8TD31 782 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 DTX3LQ8TDB6 740 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 NAT14Q8WUY8 206 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 OR1E3Q8WZA6 343 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ART4Q93070 314 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MFSD3Q96ES6 412 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SCARF2Q96GP6 870 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SNF8Q96H20 258 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CDKN2AIPNLQ96HQ2 116 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 PLEKHG4BQ96PX9 1271 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 C19orf43Q9BQ61 176 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 FRMD8Q9BZ67 464 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TRIM4Q9C037 500 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 IL22Q9GZX6 179 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 XAB2Q9HCS7 855 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MRPL40Q9NQ50 206 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 ZDHHC18Q9NUE0 388 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 PKD2L2Q9NZM6 624 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 BFARQ9NZS9 450 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 WHRNQ9P202 907 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 MARCH4Q9P2E8 410 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SUSD2Q9UGT4 822 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 RIMKLBQ9ULI2 386 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SOX13Q9UN79 622 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TMEM98Q9Y2Y6 226 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SPTAN1Q13813 2472 aaKnown RBP6.93□□□□□ -1.3
LIMD1-204ENST00000474665 AHCTF1Q8WYP5 2266 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 PTPRQQ9UMZ3 2332 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 GLYATL1P3A0A0U1RQE8 302 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 ZCWPW2A0A1B0GU75 182 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 HEATR9A2RTY3 570 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 FAM149AA5PLN7 773 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 SDR42E2A6NKP2 422 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 C2orf81A6NN90 581 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 SCAMP1O15126 338 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 INPP4BO15327 924 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 SGTAO43765 313 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 DNAJC6O75061 913 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 PPFIA2O75334 1257 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 MTX2O75431 263 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 SRP72O76094 671 aaKnown RBP6.92□□□□□ -1.3
LIMD1-204ENST00000474665 PRAMEF1O95521 474 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 CRTAMO95727 393 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 CELA2BP08218 269 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-204ENST00000474665 F7P08709 466 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-204ENST00000474665 GIMD1P0DJR0 217 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 MYCLP1P12525 358 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-204ENST00000474665 GP1BBP13224 206 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 NME1P15531 152 aaKnown RBP6.92□□□□□ -1.3
LIMD1-204ENST00000474665 TSHRP16473 764 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 FOXN2P32314 431 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 SPAM1P38567 509 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 DPP6P42658 865 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 TNNT3P45378 269 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-204ENST00000474665 GPR1P46091 355 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 RABIFP47224 123 aa6.92□□□□□ -1.3
LIMD1-204ENST00000474665 KIAA1024LP59773 190 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms